Os07g0673700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os07g0673700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.52 | 0.237 | 9.11 | 0.597 | 0.347 | 0.569 | -0.354 | -0.442 | -0.0943 | 8.7 | 1010 | 8261 | -- | -- |
| 26 | 0.238 | 9.12 | 0.51 | 0.348 | 0.601 | -0.397 | -- | -0.0991 | 8.66 | 1010 | 8165 | -- | -- |
| 25.06 | 0.233 | 9.1 | 0.652 | 0.354 | 0.607 | -- | -0.727 | -0.0286 | 9.01 | 1010 | 11029 | -- | -- |
| 26.32 | 0.239 | 9.12 | 0.459 | 0.342 | 0.571 | -- | -- | -0.109 | 8.9 | 1010 | 8103 | -- | -- |
| 32.23 | 0.264 | 9.11 | 0.653 | -- | 0.6 | -- | -0.723 | -0.0275 | -- | 1010 | 10976 | -- | -- |
| 38.38 | 0.29 | 9.15 | 0.225 | 0.345 | -- | -0.264 | -- | -0.238 | 8.95 | -- | -- | -- | -- |
| 38.6 | 0.291 | 9.15 | 0.217 | 0.345 | -- | -- | -- | -0.237 | 9.15 | -- | -- | -- | -- |
| 33.16 | 0.268 | 9.13 | 0.456 | -- | 0.579 | -- | -- | -0.107 | -- | 1010 | 8166 | -- | -- |
| 29.95 | 0.255 | 9.14 | -- | 0.365 | 0.619 | -- | -- | -0.187 | 8.66 | 1008 | 11536 | -- | -- |
| 45.47 | 0.315 | 9.16 | 0.216 | -- | -- | -- | -- | -0.236 | -- | -- | -- | -- | -- |
| 39.84 | 0.295 | 9.16 | -- | 0.345 | -- | -- | -- | -0.262 | 9.1 | -- | -- | -- | -- |
| 37.01 | 0.283 | 9.15 | -- | -- | 0.6 | -- | -- | -0.172 | -- | 1008 | 11477 | -- | -- |
| 46.7 | 0.319 | 9.17 | -- | -- | -- | -- | -- | -0.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.56 | humidity | 50 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 5 | 24.59 | humidity | 50 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 11 | 24.60 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 16 | 24.67 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 20 | 24.69 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 23 | 24.70 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 28 | 24.71 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 34 | 24.71 | humidity | 50 | 43200 | < th | dose dependent | rect. | 17 | 19 |
| 35 | 24.72 | humidity | 50 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 36 | 24.72 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 19 | 5 |
| 44 | 24.72 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 8 | 10 |
| 56 | 24.73 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 69 | 24.74 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 99 | 24.75 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 100 | 24.75 | atmosphere | 1010 | 43200 | < th | dose dependent | sin | 22 | NA |
| 101 | 24.75 | humidity | 60 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 121 | 24.76 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 143 | 24.77 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 144 | 24.77 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 146 | 24.77 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 158 | 24.78 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 161 | 24.78 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 197 | 24.80 | humidity | 50 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 220 | 24.81 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 241 | 24.82 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 393 | 24.86 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 394 | 24.86 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 6 | 14 |
| 395 | 24.86 | atmosphere | 1010 | 43200 | < th | dose dependent | no | NA | NA |
| 431 | 24.86 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 436 | 24.86 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 491 | 24.88 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 499 | 24.88 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 17 | NA |
| 560 | 24.89 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 610 | 24.90 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 7 | 10 |
| 772 | 24.92 | atmosphere | 1005 | 43200 | < th | dose independent | sin | 23 | NA |
| 778 | 24.92 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 7 | 8 |
| 784 | 24.92 | humidity | 50 | 43200 | < th | dose dependent | sin | 10 | NA |
| 785 | 24.92 | humidity | 60 | 43200 | < th | dose dependent | sin | 5 | NA |
| 899 | 24.93 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 949 | 24.93 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 18 | 17 |
| 988 | 24.94 | humidity | 50 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 990 | 24.94 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 6 | 16 |