Os07g0673600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0673600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.56 | 0.395 | 10.2 | -0.157 | 0.389 | 1.08 | 0.426 | 1.09 | -0.797 | 8 | 24.7 | 3010 | -- | -- |
| 71.59 | 0.394 | 10.2 | 0.129 | 0.368 | 1.12 | 0.461 | -- | -0.727 | 7.98 | 24.8 | 3050 | -- | -- |
| 71.07 | 0.393 | 10.2 | -0.143 | 0.378 | 1.08 | -- | 1.09 | -0.799 | 8.19 | 24.67 | 3057 | -- | -- |
| 72.06 | 0.395 | 10.1 | 0.173 | 0.357 | 1.14 | -- | -- | -0.709 | 8.36 | 24.6 | 3131 | -- | -- |
| 75.37 | 0.404 | 10.2 | -0.0903 | -- | 1.14 | -- | 1.03 | -0.8 | -- | 24.7 | 3521 | -- | -- |
| 104.07 | 0.478 | 10.2 | -0.259 | 0.37 | -- | 0.335 | -- | -1.03 | 8.72 | -- | -- | -- | -- |
| 104.43 | 0.479 | 10.2 | -0.247 | 0.369 | -- | -- | -- | -1.03 | 8.78 | -- | -- | -- | -- |
| 76.24 | 0.407 | 10.2 | 0.19 | -- | 1.18 | -- | -- | -0.722 | -- | 24.8 | 3539 | -- | -- |
| 72.76 | 0.397 | 10.2 | -- | 0.349 | 1.09 | -- | -- | -0.734 | 8.32 | 24.6 | 3155 | -- | -- |
| 112.15 | 0.495 | 10.2 | -0.247 | -- | -- | -- | -- | -1.03 | -- | -- | -- | -- | -- |
| 106.05 | 0.482 | 10.2 | -- | 0.368 | -- | -- | -- | -1 | 8.83 | -- | -- | -- | -- |
| 77.16 | 0.409 | 10.2 | -- | -- | 1.12 | -- | -- | -0.752 | -- | 24.78 | 3528 | -- | -- |
| 113.76 | 0.498 | 10.2 | -- | -- | -- | -- | -- | -1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.94 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 2 | 67.49 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 10 | 68.12 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 11 | 68.15 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 26 | 68.93 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 27 | 68.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 29 | 69.00 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 36 | 69.14 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 38 | 69.15 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 40 | 69.15 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 61 | 69.43 | temperature | 20 | 270 | > th | dose dependent | sin | 8 | NA |
| 241 | 70.89 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 257 | 70.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 353 | 71.44 | temperature | 25 | 4320 | < th | dose independent | sin | 13 | NA |
| 379 | 71.54 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 470 | 71.94 | temperature | 20 | 4320 | > th | dose dependent | sin | 13 | NA |
| 554 | 72.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 22 |
| 559 | 72.30 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 627 | 72.59 | temperature | 25 | 4320 | > th | dose independent | sin | 14 | NA |
| 646 | 72.64 | temperature | 30 | 4320 | < th | dose dependent | sin | 14 | NA |
| 673 | 72.71 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 775 | 72.99 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 13 |
| 783 | 73.03 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 950 | 73.37 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 16 |