Os07g0671700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Arginine methyltransferase-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0671700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Arginine methyltransferase-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.79 | 0.204 | 12.2 | -0.168 | 0.314 | -1.1 | -0.776 | -1.27 | 0.152 | 15.1 | 21.03 | 149 | -- | -- |
| 19.48 | 0.207 | 12.2 | -0.201 | 0.329 | -0.652 | -0.585 | -- | 0.139 | 15.5 | 21.92 | 128 | -- | -- |
| 20.32 | 0.21 | 12.2 | -0.2 | 0.327 | -0.936 | -- | -0.636 | 0.149 | 15.8 | 21.06 | 139 | -- | -- |
| 20.36 | 0.21 | 12.2 | -0.205 | 0.332 | -0.665 | -- | -- | 0.136 | 15.9 | 22 | 56 | -- | -- |
| 25.9 | 0.237 | 12.2 | -0.236 | -- | -1.03 | -- | -0.643 | 0.115 | -- | 21.69 | 124 | -- | -- |
| 23.79 | 0.229 | 12.2 | -0.0807 | 0.39 | -- | -0.631 | -- | 0.206 | 15.1 | -- | -- | -- | -- |
| 24.99 | 0.234 | 12.2 | -0.0938 | 0.394 | -- | -- | -- | 0.203 | 15.5 | -- | -- | -- | -- |
| 26.01 | 0.239 | 12.2 | -0.255 | -- | -0.789 | -- | -- | 0.104 | -- | 22.4 | 58 | -- | -- |
| 21.49 | 0.217 | 12.2 | -- | 0.344 | -0.574 | -- | -- | 0.164 | 16 | 22.07 | 49 | -- | -- |
| 33.66 | 0.271 | 12.2 | -0.11 | -- | -- | -- | -- | 0.193 | -- | -- | -- | -- | -- |
| 25.23 | 0.235 | 12.2 | -- | 0.396 | -- | -- | -- | 0.214 | 15.5 | -- | -- | -- | -- |
| 27.6 | 0.245 | 12.2 | -- | -- | -0.695 | -- | -- | 0.141 | -- | 22.42 | 58 | -- | -- |
| 33.98 | 0.272 | 12.2 | -- | -- | -- | -- | -- | 0.205 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.18 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 22 |
| 2 | 17.27 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 19 |
| 3 | 17.32 | temperature | 20 | 270 | > th | dose independent | rect. | 7 | 20 |
| 5 | 17.40 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 23 |
| 9 | 17.50 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 21 |
| 12 | 17.54 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 10 |
| 25 | 17.79 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 62 | 18.44 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 9 |
| 73 | 18.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 120 | 18.89 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 19 |
| 122 | 18.91 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 19 |
| 137 | 18.98 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 17 |
| 141 | 19.01 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 17 |
| 146 | 19.04 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 148 | 19.05 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 180 | 19.19 | temperature | 20 | 10 | < th | dose independent | rect. | 11 | 22 |
| 191 | 19.23 | temperature | 20 | 10 | > th | dose independent | sin | 11 | NA |
| 194 | 19.24 | temperature | 20 | 90 | > th | dose independent | rect. | 23 | 14 |
| 196 | 19.25 | temperature | 20 | 90 | > th | dose independent | rect. | 23 | 16 |
| 197 | 19.25 | temperature | 20 | 270 | < th | dose independent | rect. | 10 | 20 |
| 198 | 19.26 | temperature | 20 | 270 | > th | dose independent | sin | 13 | NA |
| 207 | 19.29 | temperature | 20 | 90 | > th | dose independent | sin | 11 | NA |
| 210 | 19.29 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 22 |
| 237 | 19.33 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 20 |
| 249 | 19.35 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 17 |
| 280 | 19.39 | temperature | 20 | 10 | < th | dose independent | rect. | 1 | 23 |
| 282 | 19.39 | temperature | 20 | 270 | < th | dose dependent | rect. | 9 | 21 |
| 304 | 19.43 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 306 | 19.43 | temperature | 20 | 270 | < th | dose independent | rect. | 15 | 15 |
| 315 | 19.43 | temperature | 20 | 90 | > th | dose independent | rect. | 16 | 23 |
| 341 | 19.45 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 23 |
| 343 | 19.46 | temperature | 20 | 10 | < th | dose independent | sin | 7 | NA |
| 344 | 19.46 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 353 | 19.46 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 23 |
| 355 | 19.46 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 23 |
| 358 | 19.47 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |
| 365 | 19.47 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 23 |
| 368 | 19.47 | temperature | 20 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 376 | 19.48 | temperature | 20 | 90 | < th | dose dependent | sin | 7 | NA |
| 380 | 19.49 | temperature | 20 | 90 | < th | dose independent | sin | 7 | NA |
| 391 | 19.50 | temperature | 20 | 10 | < th | dose independent | rect. | 5 | 23 |
| 444 | 19.54 | temperature | 20 | 10 | < th | dose independent | rect. | 7 | 23 |
| 537 | 19.61 | temperature | 30 | 270 | < th | dose dependent | sin | 11 | NA |
| 605 | 19.66 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 23 |
| 640 | 19.69 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 23 |
| 644 | 19.70 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 13 |
| 655 | 19.70 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 23 |
| 667 | 19.71 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 16 |
| 706 | 19.73 | temperature | 30 | 90 | < th | dose dependent | sin | 9 | NA |
| 710 | 19.73 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 711 | 19.74 | wind | 1 | 270 | > th | dose independent | rect. | 2 | 5 |
| 756 | 19.77 | temperature | 20 | 10 | > th | dose independent | rect. | 14 | 23 |
| 781 | 19.79 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 9 |
| 823 | 19.81 | humidity | 90 | 90 | < th | dose independent | rect. | 3 | 4 |
| 852 | 19.83 | temperature | 20 | 270 | < th | dose independent | sin | 12 | NA |
| 929 | 19.88 | wind | 1 | 270 | > th | dose independent | rect. | 3 | 3 |
| 966 | 19.89 | temperature | 20 | 90 | < th | dose dependent | no | NA | NA |
| 969 | 19.89 | temperature | 20 | 90 | < th | dose dependent | rect. | 15 | 21 |