Os07g0670100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0670100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.56 | 0.524 | 8.24 | 0.0761 | 2.34 | -0.527 | 1.35 | -3.09 | 0.193 | 20.7 | 23.6 | 1200 | -- | -- |
| 143.18 | 0.557 | 8.37 | -0.964 | 2.38 | -0.67 | 1.73 | -- | -0.119 | 20.4 | 22.4 | 1133 | -- | -- |
| 127.61 | 0.526 | 8.26 | 0.00258 | 2.31 | -0.577 | -- | -3.15 | 0.169 | 20.6 | 23.26 | 1029 | -- | -- |
| 148.72 | 0.568 | 8.34 | -1.12 | 2.28 | -0.785 | -- | -- | -0.0979 | 20.6 | 22.3 | 1136 | -- | -- |
| 315.41 | 0.827 | 8.2 | -0.547 | -- | -1.63 | -- | -3.51 | -0.129 | -- | 26.3 | 677 | -- | -- |
| 164.38 | 0.601 | 8.3 | -0.83 | 2.36 | -- | 1.69 | -- | 0.139 | 20.9 | -- | -- | -- | -- |
| 173.96 | 0.618 | 8.3 | -0.886 | 2.36 | -- | -- | -- | 0.138 | 20.8 | -- | -- | -- | -- |
| 320.76 | 0.834 | 8.36 | -1.44 | -- | -1.89 | -- | -- | -0.385 | -- | 25.9 | 662 | -- | -- |
| 180.7 | 0.626 | 8.31 | -- | 2.31 | -0.555 | -- | -- | 0.0668 | 20.6 | 22.3 | 938 | -- | -- |
| 490.35 | 1.03 | 8.24 | -0.888 | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
| 194.65 | 0.653 | 8.28 | -- | 2.36 | -- | -- | -- | 0.237 | 20.8 | -- | -- | -- | -- |
| 374.05 | 0.901 | 8.31 | -- | -- | -1.64 | -- | -- | -0.208 | -- | 25.89 | 637 | -- | -- |
| 511.14 | 1.06 | 8.21 | -- | -- | -- | -- | -- | 0.219 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 17 |
| 4 | 122.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 8 | 123.46 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 17 | 124.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 20 |
| 18 | 124.21 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 27 | 124.67 | temperature | 30 | 270 | < th | dose dependent | sin | 22 | NA |
| 35 | 124.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 6 |
| 46 | 125.09 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 57 | 125.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 4 |
| 73 | 125.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 79 | 125.45 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 87 | 125.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 94 | 125.59 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 123 | 125.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 138 | 125.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 184 | 125.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 20 |
| 298 | 126.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 312 | 126.41 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 314 | 126.41 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 360 | 126.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 390 | 126.68 | temperature | 25 | 720 | < th | dose independent | rect. | 24 | 21 |
| 418 | 126.80 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 509 | 127.11 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 533 | 127.17 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 559 | 127.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 636 | 127.54 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 666 | 127.67 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 708 | 127.81 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 734 | 127.89 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 791 | 128.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 796 | 128.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 836 | 128.15 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 841 | 128.17 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 854 | 128.19 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 860 | 128.21 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 925 | 128.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |