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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0668300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.6 (0.053) R2 : 0.213
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -2.36 (0.253) R2dE : 0.154 R2E : 0.094
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.812 (0.112) R2dN8 : 0.119 R2N8 : 0.0591
σ : 0.993
deviance : 454.9
__
_____
C
peak time of C : --
E
wheather : humidity
threshold : 47.04
memory length : 3555
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
439.23 0.985 3.46 0.503 0.388 0.231 0.654 -6.77 0.797 1.76 49.82 3537 -- --
464.51 1 3.6 0.0788 0.328 -1.83 0.761 -- 0.78 1.85 44.17 6469 -- --
440.52 0.978 3.47 0.487 0.395 0.249 -- -6.73 0.778 2.13 50 3559 -- --
464.48 1 3.63 0.046 0.356 -2.23 -- -- 0.814 1.39 44 5380 -- --
449.58 0.988 3.48 0.456 -- 0.0461 -- -6.36 0.796 -- 49.52 3559 -- --
517.66 1.07 3.62 0.655 0.332 -- 1.35 -- 0.736 23.6 -- -- -- --
523.14 1.07 3.62 0.594 0.386 -- -- -- 0.726 1.79 -- -- -- --
455.08 0.994 3.6 -0.014 -- -2.48 -- -- 0.795 -- 46.68 3537 -- --
445.88 0.983 3.6 -- 0.392 -2.52 -- -- 0.84 3.04 47 3537 -- --
532.16 1.08 3.62 0.609 -- -- -- -- 0.735 -- -- -- -- --
532.43 1.08 3.64 -- 0.396 -- -- -- 0.66 1.83 -- -- -- --
454.9 0.993 3.6 -- -- -2.36 -- -- 0.812 -- 47.04 3555 -- --
541.96 1.09 3.63 -- -- -- -- -- 0.667 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 433.81 wind 1 43200 < th dose independent rect. 10 3
2 434.97 wind 1 43200 > th dose independent rect. 10 3
4 436.03 humidity 70 14400 < th dose dependent rect. 7 1
14 436.26 wind 1 14400 < th dose dependent rect. 11 2
18 437.83 wind 1 14400 < th dose independent rect. 8 5
20 438.59 wind 1 14400 < th dose dependent rect. 8 5
23 438.86 wind 1 14400 > th dose independent rect. 8 5
24 440.06 wind 1 14400 < th dose independent rect. 8 1
25 440.31 wind 1 14400 < th dose dependent rect. 1 1
27 440.33 humidity 70 14400 < th dose independent rect. 6 2
37 440.59 temperature 25 43200 > th dose dependent rect. 4 1
41 441.35 temperature 30 43200 < th dose independent rect. 17 16
43 441.45 temperature 30 43200 > th dose independent rect. 17 16
50 442.05 wind 1 14400 > th dose independent rect. 8 1
55 442.36 temperature 30 43200 < th dose independent rect. 17 1
58 442.52 temperature 30 43200 > th dose independent rect. 17 1
60 442.55 temperature 30 43200 < th dose independent rect. 17 13
61 442.56 temperature 30 43200 < th dose independent rect. 17 9
65 442.57 temperature 30 43200 > th dose independent rect. 15 19
67 442.58 temperature 30 43200 < th dose independent rect. 17 6
78 442.67 temperature 30 43200 < th dose independent rect. 15 19
81 442.74 wind 1 14400 < th dose independent rect. 22 1
85 442.90 temperature 30 43200 > th dose dependent rect. 17 16
86 442.91 temperature 30 43200 > th dose independent sin 11 NA
102 442.98 atmosphere 1010 14400 > th dose independent rect. 5 1
104 443.00 temperature 30 43200 < th dose independent sin 11 NA
105 443.05 humidity 50 14400 > th dose independent rect. 11 2
183 443.56 humidity 50 14400 < th dose independent rect. 13 2
185 443.59 temperature 30 43200 > th dose dependent rect. 17 2
200 443.60 wind 1 14400 < th dose dependent rect. 8 2
205 443.78 humidity 50 14400 < th dose independent rect. 11 4
224 443.87 atmosphere 1010 14400 < th dose independent rect. 5 1
229 443.93 temperature 30 43200 > th dose dependent sin 11 NA
256 444.08 radiation 20 43200 > th dose independent rect. 13 1
285 444.25 wind 1 43200 > th dose independent rect. 21 5
295 444.37 humidity 60 14400 < th dose independent rect. 20 14
299 444.39 temperature 25 43200 > th dose dependent rect. 19 2
332 444.45 humidity 60 14400 < th dose independent rect. 9 1
336 444.48 humidity 50 14400 > th dose independent rect. 6 7
351 444.49 radiation 10 43200 > th dose independent rect. 17 1
367 444.51 humidity 50 14400 > th dose independent rect. 2 11
379 444.55 humidity 50 14400 > th dose independent rect. 20 17
392 444.59 humidity 50 14400 > th dose independent rect. 4 9
397 444.61 humidity 50 14400 > th dose independent rect. 23 14
442 444.72 humidity 50 14400 < th dose dependent rect. 14 1
462 444.77 atmosphere 1010 14400 > th dose dependent rect. 9 1
482 444.96 humidity 50 14400 < th dose independent sin 6 NA
508 445.04 temperature 25 43200 > th dose independent rect. 5 1
511 445.04 atmosphere 1010 14400 > th dose dependent rect. 6 1
531 445.06 atmosphere 1010 14400 > th dose dependent rect. 6 5
543 445.14 humidity 60 14400 > th dose independent rect. 20 13
609 445.24 wind 1 43200 < th dose independent rect. 21 5
630 445.32 temperature 30 43200 > th dose dependent no NA NA
631 445.32 temperature 30 43200 > th dose dependent rect. 8 11
727 445.35 humidity 60 14400 < th dose dependent rect. 9 1
728 445.35 humidity 50 14400 < th dose dependent rect. 11 2
744 445.36 humidity 60 14400 > th dose independent rect. 6 3
762 445.37 temperature 25 43200 < th dose independent rect. 5 1
828 445.49 humidity 60 14400 > th dose independent rect. 2 7
886 445.72 temperature 30 43200 > th dose independent no NA NA
887 445.72 temperature 30 43200 > th dose independent rect. 8 11