Os07g0668200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0668200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.56 | 0.26 | 10.5 | 0.383 | 1.46 | 0.883 | 0.151 | 0.717 | 0.00167 | 17.2 | 21.7 | 3 | -- | -- |
| 31.07 | 0.26 | 10.5 | 0.433 | 1.47 | 0.739 | 0.0142 | -- | 0.0112 | 17.2 | 21.92 | 6 | -- | -- |
| 30.61 | 0.258 | 10.5 | 0.386 | 1.46 | 0.87 | -- | 0.663 | 0.00268 | 17.2 | 21.7 | 6 | -- | -- |
| 31.05 | 0.26 | 10.5 | 0.43 | 1.46 | 0.711 | -- | -- | 0.0115 | 17.2 | 22.03 | 10 | -- | -- |
| 140.05 | 0.554 | 10.5 | 0.316 | -- | 0.532 | -- | 0.155 | -0.0754 | -- | 19.4 | 8 | -- | -- |
| 36.27 | 0.282 | 10.5 | 0.3 | 1.42 | -- | -0.0055 | -- | -0.0627 | 17.4 | -- | -- | -- | -- |
| 36.27 | 0.282 | 10.5 | 0.3 | 1.42 | -- | -- | -- | -0.0628 | 17.4 | -- | -- | -- | -- |
| 140.06 | 0.554 | 10.5 | 0.316 | -- | 0.475 | -- | -- | -0.0753 | -- | 19.4 | 8 | -- | -- |
| 35.53 | 0.278 | 10.5 | -- | 1.44 | 0.519 | -- | -- | -0.0513 | 17.3 | 22.2 | 2 | -- | -- |
| 141.21 | 0.555 | 10.5 | 0.252 | -- | -- | -- | -- | -0.0977 | -- | -- | -- | -- | -- |
| 38.65 | 0.291 | 10.5 | -- | 1.41 | -- | -- | -- | -0.0962 | 17.4 | -- | -- | -- | -- |
| 142.43 | 0.558 | 10.5 | -- | -- | 0.213 | -- | -- | -0.111 | -- | 21.3 | 3 | -- | -- |
| 142.89 | 0.558 | 10.5 | -- | -- | -- | -- | -- | -0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 2 | 27.83 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 16 |
| 26 | 28.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 8 |
| 33 | 28.95 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 60 | 29.25 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 14 |
| 67 | 29.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 69 | 29.38 | temperature | 25 | 10 | < th | dose dependent | sin | 9 | NA |
| 70 | 29.38 | temperature | 15 | 10 | > th | dose dependent | rect. | 18 | 15 |
| 90 | 29.52 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 12 |
| 144 | 29.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 2 |
| 162 | 29.83 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 170 | 29.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 6 |
| 181 | 29.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 13 |
| 201 | 29.98 | temperature | 15 | 10 | > th | dose dependent | sin | 10 | NA |
| 266 | 30.18 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 14 |
| 278 | 30.21 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 6 |
| 304 | 30.28 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 336 | 30.36 | temperature | 20 | 30 | < th | dose independent | rect. | 22 | 12 |
| 341 | 30.37 | temperature | 20 | 30 | > th | dose independent | sin | 9 | NA |
| 354 | 30.38 | humidity | 80 | 270 | < th | dose independent | rect. | 22 | 16 |
| 400 | 30.50 | temperature | 20 | 30 | < th | dose independent | sin | 9 | NA |
| 418 | 30.52 | humidity | 80 | 270 | > th | dose independent | rect. | 2 | 8 |
| 422 | 30.52 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 450 | 30.57 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 451 | 30.57 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 6 |
| 464 | 30.59 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 7 |
| 467 | 30.59 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 22 |
| 491 | 30.63 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 7 |
| 508 | 30.65 | humidity | 80 | 270 | > th | dose independent | rect. | 2 | 17 |
| 513 | 30.65 | humidity | 70 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 522 | 30.67 | radiation | 40 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 526 | 30.69 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 614 | 30.80 | temperature | 20 | 30 | < th | dose independent | rect. | 20 | 15 |
| 705 | 30.88 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 714 | 30.89 | humidity | 80 | 270 | > th | dose independent | rect. | 2 | 13 |
| 769 | 30.94 | temperature | 20 | 30 | < th | dose independent | rect. | 17 | 18 |
| 816 | 30.96 | humidity | 60 | 270 | > th | dose dependent | rect. | 2 | 9 |
| 828 | 30.97 | radiation | 40 | 270 | < th | dose independent | rect. | 3 | 16 |
| 844 | 30.98 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 19 |
| 883 | 30.99 | humidity | 90 | 270 | < th | dose dependent | rect. | 22 | 16 |
| 918 | 31.01 | temperature | 20 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 943 | 31.03 | temperature | 20 | 30 | < th | dose independent | rect. | 14 | 20 |
| 955 | 31.03 | temperature | 20 | 10 | < th | dose dependent | rect. | 16 | 19 |
| 993 | 31.05 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 19 |