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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0667100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycoside hydrolase, family 14 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.94 (0.0452) R2 : 0.0916
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.29 (0.194) R2dE : 0.0949 R2E : 0.0911
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0512 (0.0975) R2dN8 : 0.000539 R2N8 : -0.00326
σ : 0.842
deviance : 326.94
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_____
C
peak time of C : --
E
wheather : wind
threshold : 5
memory length : 5788
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 19.8
open length of G : 1.13

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
315.8 0.835 2.97 0.219 0.163 -1.22 0.53 -2.1 -0.00167 15.9 4.9 5779 20 1.03
321.5 0.835 2.93 0.314 0.23 -1.26 0.488 -- 0.0494 15.3 5 5784 19.8 1.08
316.44 0.829 2.97 0.219 0.164 -1.23 -- -2.1 -0.00155 15.5 4.902 5780 20 1.03
321.67 0.835 2.94 0.317 0.235 -1.28 -- -- 0.0846 15.7 4.904 5790 19.8 1.12
317.98 0.831 2.97 0.216 -- -1.23 -- -2.12 0.000128 -- 5 5781 20 1.05
356.33 0.885 2.97 0.18 0.131 -- 0.429 -- -0.0946 15 -- -- -- --
356.89 0.885 2.97 0.189 0.133 -- -- -- -0.0924 14.2 -- -- -- --
323.24 0.837 2.93 0.383 -- -1.29 -- -- 0.0956 -- 4.907 5788 19.8 1.1
325.33 0.84 2.94 -- 0.178 -1.28 -- -- 0.053 15.7 5.081 5789 19.8 1.12
357.94 0.884 2.97 0.184 -- -- -- -- -0.0956 -- -- -- -- --
357.83 0.885 2.97 -- 0.129 -- -- -- -0.113 14.2 -- -- -- --
326.94 0.842 2.94 -- -- -1.29 -- -- 0.0512 -- 5 5788 19.8 1.13
358.83 0.884 2.98 -- -- -- -- -- -0.116 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 317.07 wind 5.0 4320 < th dose independent rect. 20 1
2 317.44 wind 5.0 4320 > th dose independent rect. 20 1
5 319.39 wind 3.0 4320 > th dose dependent rect. 20 1
8 320.57 wind 5.0 4320 > th dose dependent rect. 20 5
18 322.59 humidity 80.0 1440 < th dose independent rect. 23 2
29 323.48 humidity 80.0 1440 < th dose dependent rect. 23 2
31 323.78 wind 7.0 4320 > th dose independent rect. 20 6
41 324.40 wind 9.0 4320 < th dose dependent rect. 20 1
55 325.40 wind 5.0 1440 > th dose dependent rect. 19 15
80 326.83 humidity 80.0 1440 > th dose independent rect. 23 3
102 327.71 humidity 80.0 1440 < th dose independent rect. 22 7
115 327.98 humidity 80.0 1440 < th dose dependent rect. 22 8
119 328.22 wind 5.0 4320 < th dose independent rect. 17 8
122 328.34 wind 5.0 4320 > th dose independent rect. 17 8
136 328.71 temperature 20.0 1440 > th dose independent rect. 18 1
148 329.08 humidity 90.0 1440 < th dose dependent rect. 3 3
150 329.12 humidity 80.0 1440 > th dose independent rect. 22 8
238 330.14 wind 5.0 1440 > th dose dependent sin 10 NA
246 330.33 wind 5.0 1440 > th dose independent rect. 19 15
269 330.58 atmosphere 995.0 14400 > th dose independent rect. 17 1
284 330.82 atmosphere 995.0 14400 < th dose independent rect. 17 1
286 330.82 atmosphere 995.0 14400 < th dose dependent rect. 17 1
328 331.20 temperature 20.0 1440 < th dose independent rect. 18 1
330 331.27 wind 5.0 1440 < th dose independent rect. 19 15
340 331.47 precipitation 0.1 14400 > th dose dependent rect. 20 3
352 331.65 humidity 70.0 1440 > th dose dependent rect. 2 1
372 331.87 atmosphere 995.0 14400 > th dose independent rect. 13 6
376 331.92 atmosphere 995.0 14400 > th dose independent rect. 6 13
455 332.25 wind 5.0 1440 < th dose independent rect. 17 17
456 332.26 atmosphere 995.0 14400 > th dose independent rect. 13 2
478 332.41 temperature 20.0 4320 > th dose independent rect. 21 2
487 332.44 humidity 80.0 1440 < th dose dependent rect. 21 10
505 332.60 wind 5.0 1440 > th dose independent sin 12 NA
625 333.27 wind 5.0 1440 < th dose independent sin 12 NA
637 333.35 humidity 80.0 720 < th dose independent rect. 21 19
654 333.48 temperature 20.0 720 < th dose independent rect. 8 12
668 333.57 humidity 80.0 720 > th dose independent rect. 1 5
674 333.63 temperature 20.0 4320 < th dose independent rect. 21 2
678 333.65 temperature 20.0 4320 > th dose independent rect. 18 6
681 333.67 precipitation 0.1 14400 < th dose independent rect. 20 2
683 333.67 precipitation 0.1 14400 < th dose dependent rect. 20 2
684 333.68 precipitation 0.1 14400 > th dose independent rect. 20 2
720 333.84 humidity 80.0 1440 > th dose independent rect. 1 1
736 333.88 humidity 80.0 720 < th dose independent rect. 22 12
764 333.98 temperature 20.0 720 < th dose independent rect. 10 9
796 334.08 wind 5.0 1440 < th dose independent rect. 17 20
851 334.27 humidity 70.0 1440 > th dose dependent rect. 1 5
856 334.29 humidity 80.0 720 < th dose independent sin 8 NA
864 334.31 humidity 80.0 720 > th dose independent rect. 1 14
958 334.80 wind 7.0 4320 < th dose independent rect. 8 1
972 334.87 atmosphere 995.0 14400 < th dose independent sin 22 NA
995 334.95 wind 9.0 43200 > th dose dependent rect. 18 12
996 334.97 atmosphere 995.0 14400 > th dose independent sin 22 NA