Os07g0666200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0666200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.7 | 0.292 | 7.58 | 0.405 | 0.792 | -0.448 | -0.00918 | -0.637 | 0.211 | 15.8 | 69.92 | 3299 | -- | -- |
| 39.26 | 0.292 | 7.57 | 0.464 | 0.794 | -0.503 | -0.122 | -- | 0.227 | 15.7 | 69.8 | 3171 | -- | -- |
| 38.7 | 0.29 | 7.58 | 0.405 | 0.792 | -0.447 | -- | -0.64 | 0.211 | 15.8 | 69.92 | 3300 | -- | -- |
| 39.31 | 0.292 | 7.57 | 0.463 | 0.795 | -0.497 | -- | -- | 0.224 | 15.7 | 69.82 | 3180 | -- | -- |
| 66.25 | 0.379 | 7.58 | 0.383 | -- | -0.528 | -- | -0.509 | 0.177 | -- | 69.03 | 2627 | -- | -- |
| 44.96 | 0.314 | 7.58 | 0.422 | 0.755 | -- | 0.00977 | -- | 0.185 | 15.6 | -- | -- | -- | -- |
| 44.96 | 0.314 | 7.58 | 0.422 | 0.755 | -- | -- | -- | 0.185 | 15.6 | -- | -- | -- | -- |
| 66.44 | 0.38 | 7.57 | 0.475 | -- | -0.575 | -- | -- | 0.208 | -- | 69 | 2604 | -- | -- |
| 44.97 | 0.312 | 7.59 | -- | 0.766 | -0.579 | -- | -- | 0.167 | 15.6 | 67.99 | 7422 | -- | -- |
| 76.66 | 0.409 | 7.58 | 0.391 | -- | -- | -- | -- | 0.165 | -- | -- | -- | -- | -- |
| 49.66 | 0.33 | 7.59 | -- | 0.747 | -- | -- | -- | 0.138 | 15.6 | -- | -- | -- | -- |
| 70.04 | 0.39 | 7.58 | -- | -- | -0.723 | -- | -- | 0.129 | -- | 65 | 26999 | -- | -- |
| 80.69 | 0.419 | 7.59 | -- | -- | -- | -- | -- | 0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.28 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 2 | 37.32 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 3 | 37.54 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 5 | 37.61 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 21 | 38.14 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 23 | 38.16 | radiation | 40.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 24 | 38.16 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 40 | 38.45 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 47 | 38.51 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 48 | 38.54 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 17 | 16 |
| 49 | 38.55 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 50 | 38.57 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 51 | 38.58 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 53 | 38.59 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 23 | 10 |
| 57 | 38.60 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 1 | 8 |
| 67 | 38.63 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 79 | 38.75 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 82 | 38.76 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 83 | 38.76 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 17 | 16 |
| 84 | 38.76 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 85 | 38.76 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 1 | 9 |
| 92 | 38.76 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 99 | 38.79 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 100 | 38.81 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 124 | 38.86 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 142 | 38.87 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 150 | 38.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 178 | 38.91 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 183 | 38.92 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 201 | 38.94 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 231 | 39.04 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 2 |
| 233 | 39.04 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 234 | 39.04 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 239 | 39.06 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 269 | 39.09 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 18 |
| 276 | 39.11 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 277 | 39.11 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 3 |
| 278 | 39.11 | radiation | 40.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 280 | 39.11 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 309 | 39.16 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 316 | 39.17 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 22 |
| 324 | 39.17 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 331 | 39.19 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 333 | 39.19 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 334 | 39.19 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 337 | 39.19 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 338 | 39.19 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 340 | 39.19 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 344 | 39.19 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 345 | 39.20 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 358 | 39.23 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 366 | 39.25 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 369 | 39.25 | wind | 5.0 | 30 | < th | dose independent | rect. | 6 | 21 |
| 374 | 39.26 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 375 | 39.26 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 383 | 39.27 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 395 | 39.28 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 412 | 39.29 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 21 |
| 418 | 39.29 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 419 | 39.30 | radiation | 20.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 420 | 39.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 3 |
| 423 | 39.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 424 | 39.30 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 435 | 39.32 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 451 | 39.32 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 488 | 39.35 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 499 | 39.36 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 507 | 39.37 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 508 | 39.37 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 541 | 39.40 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 545 | 39.41 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 547 | 39.41 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 548 | 39.41 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 551 | 39.41 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 552 | 39.41 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 554 | 39.41 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 570 | 39.41 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 603 | 39.43 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 1 | 12 |
| 626 | 39.44 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 632 | 39.44 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 19 | 4 |
| 662 | 39.46 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 7 |
| 664 | 39.46 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 21 |
| 672 | 39.47 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 673 | 39.47 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 675 | 39.47 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 676 | 39.47 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 680 | 39.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 682 | 39.48 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 683 | 39.48 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 686 | 39.48 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 687 | 39.48 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 689 | 39.48 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 699 | 39.48 | radiation | 20.0 | 4320 | < th | dose dependent | sin | 9 | NA |
| 712 | 39.49 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 20 | 14 |
| 755 | 39.52 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 793 | 39.54 | wind | 5.0 | 30 | < th | dose independent | rect. | 16 | 11 |
| 816 | 39.55 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 8 | 2 |
| 828 | 39.55 | wind | 9.0 | 30 | < th | dose dependent | rect. | 17 | 10 |
| 834 | 39.56 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 839 | 39.56 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 19 | 16 |
| 906 | 39.59 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 7 | 6 |
| 913 | 39.59 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 978 | 39.62 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 981 | 39.62 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 9 | 18 |
| 993 | 39.63 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 14 |