Os07g0665900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
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Os07g0665900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 179.21 | 0.629 | 7.95 | 0.256 | 0.405 | 2.35 | -1.02 | -0.112 | -0.273 | 8.03 | 21.92 | 66 | -- | -- |
| 179.15 | 0.628 | 7.95 | 0.298 | 0.258 | 2.38 | -1.1 | -- | -0.268 | 7.82 | 21.92 | 65 | -- | -- |
| 182.28 | 0.629 | 7.95 | 0.205 | 0.409 | 2.37 | -- | -0.214 | -0.277 | 7.98 | 22 | 66 | -- | -- |
| 182.33 | 0.629 | 7.95 | 0.246 | 0.412 | 2.36 | -- | -- | -0.267 | 8.02 | 22 | 66 | -- | -- |
| 186.2 | 0.639 | 7.96 | 0.277 | -- | 2.38 | -- | 0.0521 | -0.266 | -- | 21.67 | 28 | -- | -- |
| 275.02 | 0.777 | 7.86 | 0.74 | 0.898 | -- | 0.148 | -- | 0.119 | 13.5 | -- | -- | -- | -- |
| 275.1 | 0.777 | 7.86 | 0.745 | 0.897 | -- | -- | -- | 0.119 | 13.4 | -- | -- | -- | -- |
| 186.15 | 0.638 | 7.96 | 0.271 | -- | 2.41 | -- | -- | -0.264 | -- | 21.8 | 10 | -- | -- |
| 183.8 | 0.631 | 7.95 | -- | 0.42 | 2.44 | -- | -- | -0.307 | 7.72 | 21.91 | 66 | -- | -- |
| 324.56 | 0.842 | 7.87 | 0.709 | -- | -- | -- | -- | 0.1 | -- | -- | -- | -- | -- |
| 289.72 | 0.796 | 7.88 | -- | 0.884 | -- | -- | -- | 0.0365 | 13.4 | -- | -- | -- | -- |
| 187.97 | 0.639 | 7.97 | -- | -- | 2.45 | -- | -- | -0.307 | -- | 21.66 | 7 | -- | -- |
| 337.82 | 0.858 | 7.89 | -- | -- | -- | -- | -- | 0.0217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 177.39 | temperature | 10 | 90 | > th | dose dependent | sin | 1 | NA |
| 3 | 177.54 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 5 | 178.04 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 15 |
| 11 | 179.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 12 | 179.49 | temperature | 20 | 270 | > th | dose dependent | sin | 4 | NA |
| 13 | 179.56 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 14 |
| 18 | 179.96 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 46 | 181.10 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 14 |
| 47 | 181.16 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 54 | 181.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 59 | 182.10 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 60 | 182.18 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 66 | 182.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 67 | 182.27 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 70 | 182.30 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 75 | 182.42 | temperature | 30 | 270 | < th | dose dependent | sin | 2 | NA |
| 112 | 183.35 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 134 | 183.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 14 |
| 153 | 184.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 8 |
| 184 | 184.86 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 11 |
| 270 | 186.06 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 274 | 186.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 14 |
| 292 | 186.29 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 340 | 186.92 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 376 | 187.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 17 |
| 707 | 189.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 13 |
| 725 | 189.96 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 959 | 192.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 966 | 192.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 5 |
| 986 | 192.79 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 5 |