Os07g0665100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0665100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 233.27 | 0.718 | 6.57 | 0.491 | 3.65 | 1.77 | 0.613 | -0.213 | 0.0849 | 21.2 | 20.9 | 636 | 3.12 | -- |
| 233.13 | 0.711 | 6.56 | 0.546 | 3.66 | 1.77 | 0.7 | -- | 0.0901 | 21.2 | 20.9 | 621 | 2.89 | -- |
| 234.18 | 0.713 | 6.57 | 0.415 | 3.66 | 1.73 | -- | -0.433 | 0.0833 | 21.3 | 21 | 623 | 2.77 | -- |
| 234.59 | 0.713 | 6.57 | 0.493 | 3.72 | 1.8 | -- | -- | 0.0635 | 21.3 | 21 | 620 | 2.66 | -- |
| 681.46 | 1.22 | 6.38 | 0.552 | -- | 1.1 | -- | -0.428 | 0.397 | -- | 28.6 | 996 | 2.57 | -- |
| 309.29 | 0.824 | 6.45 | 0.945 | 2.66 | -- | 0.0855 | -- | 0.459 | 21.7 | -- | -- | -- | -- |
| 309.32 | 0.824 | 6.45 | 0.942 | 2.66 | -- | -- | -- | 0.458 | 21.7 | -- | -- | -- | -- |
| 653.58 | 1.19 | 6.39 | 0.622 | -- | 1.43 | -- | -- | 0.284 | -- | 28.2 | 952 | 0.00202 | -- |
| 241.21 | 0.723 | 6.59 | -- | 3.71 | 1.82 | -- | -- | 0.0299 | 21.3 | 21 | 623 | 2.67 | -- |
| 729.45 | 1.26 | 6.38 | 0.966 | -- | -- | -- | -- | 0.455 | -- | -- | -- | -- | -- |
| 332.7 | 0.853 | 6.47 | -- | 2.66 | -- | -- | -- | 0.354 | 21.7 | -- | -- | -- | -- |
| 658.54 | 1.2 | 6.45 | -- | -- | 1.58 | -- | -- | 0.129 | -- | 27.12 | 1004 | 0.00858 | -- |
| 754.09 | 1.28 | 6.4 | -- | -- | -- | -- | -- | 0.348 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 230.37 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 9 |
| 10 | 231.96 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 1 |
| 13 | 232.76 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 7 |
| 14 | 233.34 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 3 |
| 43 | 236.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 9 |
| 53 | 237.60 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 6 |
| 70 | 238.59 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 5 |
| 84 | 239.26 | temperature | 20 | 720 | > th | dose independent | sin | 10 | NA |
| 99 | 239.90 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 3 |
| 132 | 241.11 | temperature | 20 | 720 | < th | dose independent | sin | 9 | NA |
| 226 | 244.93 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 467 | 250.99 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 1 |
| 636 | 254.64 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 725 | 256.06 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 14 |
| 882 | 258.18 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 884 | 258.19 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 22 |
| 959 | 258.97 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 21 |
| 996 | 259.42 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |