Os07g0664500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glucose/ribitol dehydrogenase family protein.
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Os07g0664500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glucose/ribitol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 226.76 | 0.708 | 4.51 | -3.27 | 0.863 | 2.97 | 0.149 | -8.17 | 0.013 | 9.36 | 20.32 | 10 | -- | -- |
| 271 | 0.773 | 4.35 | -1.81 | 0.847 | 2.81 | -1.99 | -- | 0.462 | 11.2 | 15.3 | 4 | -- | -- |
| 226.82 | 0.701 | 4.51 | -3.24 | 0.863 | 2.95 | -- | -8.07 | 0.0201 | 9.41 | 20.33 | 10 | -- | -- |
| 283.53 | 0.789 | 4.35 | -1.95 | 0.88 | 3.05 | -- | -- | 0.414 | 9.81 | 15.3 | 4 | -- | -- |
| 267.8 | 0.766 | 4.54 | -3.31 | -- | 3.28 | -- | -8.23 | -0.0169 | -- | 20.2 | 7 | -- | -- |
| 360.16 | 0.89 | 4.25 | -1.27 | 1.47 | -- | -2.06 | -- | 0.865 | 12.3 | -- | -- | -- | -- |
| 377.97 | 0.91 | 4.25 | -1.35 | 1.48 | -- | -- | -- | 0.853 | 12.1 | -- | -- | -- | -- |
| 326.37 | 0.845 | 4.39 | -2.05 | -- | 3.51 | -- | -- | 0.35 | -- | 15.3 | 3 | -- | -- |
| 374.65 | 0.906 | 4.28 | -- | 1.03 | 2.14 | -- | -- | 0.742 | 10.9 | 15.3 | 4 | -- | -- |
| 515.26 | 1.06 | 4.28 | -1.4 | -- | -- | -- | -- | 0.832 | -- | -- | -- | -- | -- |
| 426.02 | 0.966 | 4.22 | -- | 1.49 | -- | -- | -- | 1 | 12.1 | -- | -- | -- | -- |
| 428.11 | 0.967 | 4.32 | -- | -- | 2.48 | -- | -- | 0.647 | -- | 19.02 | 2 | -- | -- |
| 566.73 | 1.11 | 4.25 | -- | -- | -- | -- | -- | 0.987 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 224.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 4 | 227.16 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 5 | 227.20 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 7 | 228.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 8 | 229.03 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 10 | 229.34 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 11 | 229.60 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 12 | 229.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 14 | 230.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 15 | 230.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 16 | 230.43 | temperature | 20 | 90 | > th | dose dependent | rect. | 2 | 23 |
| 23 | 231.93 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 26 | 232.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 27 | 232.32 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 30 | 232.86 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 31 | 232.89 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 35 | 233.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 49 | 234.44 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 53 | 234.93 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 61 | 235.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 78 | 236.16 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 82 | 236.25 | temperature | 20 | 1440 | > th | dose dependent | sin | 19 | NA |
| 84 | 236.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 94 | 236.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 109 | 236.79 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 123 | 237.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 169 | 237.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 18 |
| 263 | 238.56 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 313 | 239.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 318 | 239.21 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 319 | 239.21 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 328 | 239.34 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 342 | 239.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 367 | 239.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 380 | 240.09 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 407 | 240.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 415 | 240.53 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 451 | 241.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 506 | 241.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 19 |
| 576 | 243.02 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 615 | 243.48 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 13 |
| 638 | 243.62 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 641 | 243.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 643 | 243.64 | temperature | 15 | 270 | > th | dose dependent | sin | 2 | NA |
| 666 | 243.81 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 672 | 243.83 | wind | 5 | 43200 | > th | dose dependent | sin | 17 | NA |
| 703 | 243.99 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 712 | 244.07 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 715 | 244.09 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 725 | 244.17 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 17 |
| 727 | 244.18 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 742 | 244.24 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 754 | 244.31 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 779 | 244.41 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 782 | 244.43 | temperature | 15 | 270 | > th | dose dependent | sin | 5 | NA |
| 786 | 244.45 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 13 |
| 797 | 244.50 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 19 |
| 800 | 244.52 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 810 | 244.55 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 23 |
| 813 | 244.57 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 13 |
| 815 | 244.58 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 844 | 244.68 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 9 |
| 853 | 244.71 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 883 | 244.85 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 20 |
| 908 | 244.93 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 912 | 244.95 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 20 |
| 921 | 244.97 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 13 |
| 943 | 245.06 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 17 |
| 985 | 245.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 986 | 245.17 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 7 |