Os07g0664300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glucose/ribitol dehydrogenase family protein.
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Os07g0664300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glucose/ribitol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.76 | 0.387 | 2.86 | -0.14 | 0.0151 | -0.507 | 0.206 | 2.25 | 0.0977 | 15.3 | 1.093 | 16 | -- | -- |
| 71.94 | 0.395 | 2.84 | -0.0544 | 0.00483 | -0.345 | -0.452 | -- | 0.121 | 3.13 | 1.1 | 16 | -- | -- |
| 67.88 | 0.384 | 2.86 | -0.136 | 0.0263 | -0.525 | -- | 2.35 | 0.109 | 16.4 | 1.1 | 16 | -- | -- |
| 72.57 | 0.397 | 2.84 | -0.0402 | 0.019 | -0.33 | -- | -- | 0.123 | 23.2 | 1.033 | 16 | -- | -- |
| 67.91 | 0.384 | 2.86 | -0.138 | -- | -0.499 | -- | 2.33 | 0.0977 | -- | 1.087 | 16 | -- | -- |
| 74.55 | 0.405 | 2.84 | -0.0113 | 0.0924 | -- | -0.39 | -- | 0.118 | 3.24 | -- | -- | -- | -- |
| 75.04 | 0.406 | 2.84 | -0.00356 | 0.0917 | -- | -- | -- | 0.12 | 3.55 | -- | -- | -- | -- |
| 72.59 | 0.397 | 2.83 | -0.0442 | -- | -0.337 | -- | -- | 0.124 | -- | 1.027 | 16 | -- | -- |
| 72.61 | 0.397 | 2.83 | -- | 0.0188 | -0.331 | -- | -- | 0.128 | 22.1 | 1.074 | 16 | -- | -- |
| 75.51 | 0.406 | 2.84 | 0.000295 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 75.04 | 0.405 | 2.84 | -- | 0.0916 | -- | -- | -- | 0.121 | 3.55 | -- | -- | -- | -- |
| 72.64 | 0.397 | 2.83 | -- | -- | -0.331 | -- | -- | 0.129 | -- | 1.068 | 16 | -- | -- |
| 75.51 | 0.406 | 2.84 | -- | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.46 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 50.56 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 4 | 50.61 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 5 | 50.62 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 9 | 50.68 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 12 | 50.70 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 14 | 50.78 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 19 | 50.82 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 21 | 50.82 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 22 | 50.82 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 26 | 50.82 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 28 | 50.82 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 33 | 50.82 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 34 | 50.82 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 35 | 50.82 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 40 | 50.82 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 41 | 50.83 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 49 | 51.23 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 50 | 51.65 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 56 | 52.13 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 64 | 52.50 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 65 | 52.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 68 | 52.50 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 72 | 52.50 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 81 | 52.50 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 82 | 52.50 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 102 | 52.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 105 | 52.50 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 161 | 53.81 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 163 | 54.02 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 173 | 55.24 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 174 | 55.24 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 198 | 60.58 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 201 | 60.96 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 256 | 64.08 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 279 | 64.86 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 280 | 64.91 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 282 | 65.07 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 342 | 66.43 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 425 | 67.25 | wind | 1.0 | 10 | > th | dose independent | sin | 15 | NA |
| 445 | 67.58 | wind | 1.0 | 10 | > th | dose independent | rect. | 23 | 23 |
| 507 | 68.17 | wind | 3.0 | 30 | < th | dose dependent | rect. | 22 | 5 |
| 566 | 68.46 | wind | 3.0 | 30 | < th | dose dependent | rect. | 18 | 9 |
| 571 | 68.48 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 636 | 68.89 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 642 | 68.93 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 683 | 69.13 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 10 |
| 700 | 69.24 | wind | 3.0 | 30 | < th | dose dependent | rect. | 10 | 17 |
| 701 | 69.25 | temperature | 25.0 | 270 | > th | dose independent | sin | 10 | NA |
| 718 | 69.32 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 719 | 69.33 | temperature | 25.0 | 270 | < th | dose independent | sin | 10 | NA |
| 741 | 69.40 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 754 | 69.45 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 755 | 69.46 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 756 | 69.46 | temperature | 10.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 764 | 69.48 | temperature | 10.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 765 | 69.48 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 766 | 69.48 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 768 | 69.48 | temperature | 10.0 | 720 | > th | dose independent | rect. | 11 | 16 |
| 782 | 69.52 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 11 | 16 |
| 786 | 69.54 | wind | 1.0 | 10 | > th | dose independent | rect. | 11 | 23 |
| 835 | 69.61 | humidity | 50.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 839 | 69.61 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 842 | 69.62 | wind | 1.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 853 | 69.64 | wind | 1.0 | 10 | < th | dose independent | sin | 16 | NA |
| 880 | 69.74 | temperature | 25.0 | 270 | < th | dose independent | rect. | 19 | 13 |
| 896 | 69.80 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 8 |
| 899 | 69.80 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 907 | 69.84 | wind | 1.0 | 10 | > th | dose independent | rect. | 18 | 15 |
| 932 | 69.91 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 934 | 69.91 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 17 |