Os07g0664200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glucose/ribitol dehydrogenase family protein.
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Os07g0664200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glucose/ribitol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.47 | 0.677 | 2.8 | -0.0967 | 0.00426 | -2.95 | -0.521 | -24.1 | -0.133 | 0.458 | 10.8 | 7 | -- | -- |
| 217.37 | 0.687 | 2.85 | -0.159 | 0.144 | 4.17 | -0.844 | -- | -0.0978 | 18 | 9.678 | 6 | -- | -- |
| 212.64 | 0.679 | 2.8 | -0.0781 | 0.00697 | -2.91 | -- | -23.8 | -0.132 | 22.7 | 10.75 | 9 | -- | -- |
| 212.64 | 0.679 | 2.82 | -0.0266 | 0.00458 | 5.2 | -- | -- | -0.132 | 18 | 10.26 | 7 | -- | -- |
| 212.64 | 0.679 | 2.8 | -0.0778 | -- | -2.87 | -- | -23.7 | -0.132 | -- | 10.71 | 11 | -- | -- |
| 238.47 | 0.724 | 2.82 | -0.118 | 0.0107 | -- | -0.507 | -- | -0.156 | 21.8 | -- | -- | -- | -- |
| 239.33 | 0.724 | 2.82 | -0.0969 | 0.0501 | -- | -- | -- | -0.153 | 17.1 | -- | -- | -- | -- |
| 212.64 | 0.679 | 2.82 | -0.0267 | -- | 5.2 | -- | -- | -0.132 | -- | 10.26 | 7 | -- | -- |
| 212.66 | 0.679 | 2.82 | -- | 0.00746 | 5.21 | -- | -- | -0.129 | 21.4 | 10.21 | 7 | -- | -- |
| 239.46 | 0.723 | 2.82 | -0.0987 | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
| 239.58 | 0.724 | 2.82 | -- | 0.0518 | -- | -- | -- | -0.143 | 17 | -- | -- | -- | -- |
| 212.66 | 0.679 | 2.82 | -- | -- | 5.21 | -- | -- | -0.129 | -- | 10.24 | 7 | -- | -- |
| 239.72 | 0.723 | 2.82 | -- | -- | -- | -- | -- | -0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 205.42 | radiation | 1 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 3 | 207.88 | radiation | 1 | 10 | < th | dose independent | rect. | 16 | 1 |
| 5 | 209.02 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 1 |
| 7 | 209.02 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 9 | 211.43 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 1 |
| 17 | 211.43 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 59 | 214.31 | radiation | 1 | 10 | < th | dose independent | rect. | 11 | 6 |
| 63 | 214.48 | wind | 9 | 30 | > th | dose dependent | rect. | 15 | 11 |
| 83 | 214.51 | wind | 9 | 30 | > th | dose dependent | rect. | 15 | 7 |
| 101 | 214.73 | radiation | 1 | 10 | < th | dose dependent | rect. | 11 | 6 |
| 174 | 216.04 | humidity | 90 | 90 | > th | dose independent | rect. | 14 | 1 |
| 177 | 216.04 | humidity | 90 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 181 | 216.35 | wind | 3 | 90 | < th | dose independent | rect. | 14 | 1 |
| 235 | 218.13 | wind | 9 | 30 | > th | dose dependent | sin | 14 | NA |
| 237 | 218.48 | radiation | 10 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 243 | 218.82 | wind | 1 | 90 | < th | dose independent | rect. | 6 | 1 |
| 278 | 219.15 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 15 | 1 |
| 280 | 219.30 | wind | 9 | 30 | > th | dose independent | rect. | 15 | 11 |
| 300 | 219.35 | wind | 9 | 30 | > th | dose independent | rect. | 15 | 7 |
| 317 | 219.53 | temperature | 25 | 10 | < th | dose independent | rect. | 15 | 1 |
| 326 | 219.76 | humidity | 70 | 90 | > th | dose independent | rect. | 14 | 2 |
| 370 | 220.07 | wind | 5 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 382 | 220.39 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 399 | 221.01 | wind | 5 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 404 | 221.16 | temperature | 25 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 408 | 221.50 | radiation | 1 | 10 | < th | dose dependent | rect. | 6 | 11 |
| 409 | 221.52 | humidity | 60 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 445 | 222.39 | radiation | 20 | 90 | < th | dose independent | rect. | 14 | 1 |
| 455 | 222.47 | wind | 5 | 90 | < th | dose independent | rect. | 14 | 3 |
| 489 | 223.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 504 | 223.29 | radiation | 1 | 10 | < th | dose independent | rect. | 6 | 11 |
| 547 | 224.10 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 626 | 225.16 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 640 | 225.34 | humidity | 90 | 90 | > th | dose independent | rect. | 6 | 10 |
| 655 | 225.46 | humidity | 70 | 30 | > th | dose independent | rect. | 14 | 18 |
| 676 | 225.64 | humidity | 90 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 681 | 225.73 | humidity | 80 | 90 | > th | dose dependent | rect. | 6 | 10 |
| 683 | 225.75 | wind | 1 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 684 | 225.76 | wind | 9 | 30 | > th | dose independent | sin | 14 | NA |
| 686 | 225.76 | radiation | 40 | 270 | < th | dose dependent | rect. | 12 | 3 |
| 695 | 225.89 | wind | 3 | 270 | < th | dose dependent | rect. | 18 | 1 |
| 706 | 225.95 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 18 | 1 |
| 739 | 226.37 | wind | 3 | 270 | < th | dose independent | rect. | 18 | 1 |
| 743 | 226.42 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 19 | 3 |
| 744 | 226.43 | radiation | 10 | 90 | < th | dose independent | rect. | 5 | 11 |
| 762 | 226.65 | wind | 9 | 270 | < th | dose dependent | rect. | 3 | 13 |
| 763 | 226.68 | wind | 7 | 270 | < th | dose independent | rect. | 3 | 13 |
| 776 | 226.81 | wind | 5 | 90 | < th | dose independent | rect. | 14 | 18 |
| 777 | 226.81 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 20 |
| 810 | 227.06 | radiation | 10 | 270 | < th | dose dependent | rect. | 4 | 12 |
| 830 | 227.21 | radiation | 30 | 270 | < th | dose independent | rect. | 12 | 3 |
| 842 | 227.29 | humidity | 80 | 10 | > th | dose independent | rect. | 7 | 1 |
| 852 | 227.34 | wind | 9 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 894 | 227.68 | radiation | 10 | 270 | < th | dose independent | rect. | 3 | 13 |
| 895 | 227.68 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 19 | 4 |
| 936 | 227.95 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 2 | 7 |
| 939 | 227.97 | wind | 9 | 30 | < th | dose independent | sin | 14 | NA |
| 957 | 228.06 | wind | 9 | 30 | > th | dose dependent | rect. | 10 | 6 |
| 982 | 228.09 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 3 | 5 |