Os07g0664000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glucose/ribitol dehydrogenase family protein.
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Os07g0664000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glucose/ribitol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 194.72 | 0.656 | 8.42 | -0.828 | 0.43 | -4.96 | 1.27 | -6.47 | 0.306 | 6.25 | 0.9915 | 1446 | -- | -- |
| 215.59 | 0.684 | 8.51 | -1.47 | 0.452 | -3.63 | 1.42 | -- | 0.209 | 6.4 | 1.29 | 1442 | -- | -- |
| 191.94 | 0.645 | 8.33 | -0.517 | 0.397 | -5.76 | -- | -10.1 | 0.417 | 4.35 | 0.4668 | 1455 | -- | -- |
| 219.15 | 0.689 | 8.52 | -1.47 | 0.521 | -3.8 | -- | -- | 0.194 | 4.24 | 1.306 | 1465 | -- | -- |
| 201.36 | 0.661 | 8.36 | -0.58 | -- | -5.93 | -- | -9.96 | 0.376 | -- | 0.4718 | 1449 | -- | -- |
| 364.34 | 0.895 | 8.4 | -0.638 | 0.494 | -- | 1.45 | -- | 0.679 | 6.16 | -- | -- | -- | -- |
| 369.55 | 0.9 | 8.41 | -0.623 | 0.501 | -- | -- | -- | 0.674 | 6.16 | -- | -- | -- | -- |
| 230.98 | 0.708 | 8.53 | -1.43 | -- | -3.73 | -- | -- | 0.203 | -- | 1.409 | 1447 | -- | -- |
| 265.42 | 0.759 | 8.49 | -- | 0.474 | -3.08 | -- | -- | 0.399 | 4.4 | 2.16 | 1471 | -- | -- |
| 382.55 | 0.914 | 8.42 | -0.609 | -- | -- | -- | -- | 0.685 | -- | -- | -- | -- | -- |
| 379.79 | 0.912 | 8.39 | -- | 0.492 | -- | -- | -- | 0.743 | 6.22 | -- | -- | -- | -- |
| 275.81 | 0.773 | 8.48 | -- | -- | -2.98 | -- | -- | 0.404 | -- | 2.172 | 1450 | -- | -- |
| 392.34 | 0.925 | 8.4 | -- | -- | -- | -- | -- | 0.753 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 182.42 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 3 | 183.25 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 4 | 183.34 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 23 | 187.43 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 64 | 193.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 85 | 194.90 | radiation | 1 | 1440 | < th | dose dependent | sin | 14 | NA |
| 90 | 195.06 | radiation | 1 | 1440 | < th | dose dependent | rect. | 24 | 20 |
| 92 | 195.06 | radiation | 1 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 105 | 195.14 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 106 | 195.15 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 121 | 195.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 16 |
| 168 | 196.62 | radiation | 1 | 4320 | < th | dose dependent | rect. | 12 | 15 |
| 169 | 196.63 | radiation | 1 | 4320 | < th | dose dependent | rect. | 12 | 12 |
| 176 | 196.83 | radiation | 1 | 4320 | < th | dose dependent | rect. | 12 | 8 |
| 181 | 197.08 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 192 | 197.23 | radiation | 1 | 4320 | < th | dose dependent | sin | 17 | NA |
| 202 | 197.40 | radiation | 1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 228 | 197.87 | radiation | 1 | 4320 | < th | dose dependent | rect. | 16 | 11 |
| 232 | 197.90 | radiation | 1 | 4320 | < th | dose dependent | rect. | 16 | 8 |
| 237 | 197.97 | radiation | 1 | 4320 | < th | dose dependent | rect. | 9 | 18 |
| 240 | 197.98 | radiation | 1 | 4320 | < th | dose dependent | rect. | 9 | 15 |
| 250 | 198.07 | radiation | 1 | 4320 | < th | dose dependent | rect. | 16 | 4 |
| 260 | 198.17 | radiation | 1 | 4320 | < th | dose dependent | rect. | 9 | 11 |
| 273 | 198.34 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 286 | 198.53 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 327 | 199.60 | radiation | 1 | 1440 | < th | dose dependent | sin | 23 | NA |
| 333 | 199.66 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 338 | 199.74 | humidity | 90 | 43200 | > th | dose dependent | sin | 16 | NA |
| 362 | 200.20 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 378 | 200.43 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 19 |
| 380 | 200.48 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 390 | 200.73 | humidity | 90 | 43200 | < th | dose independent | sin | 16 | NA |
| 476 | 201.52 | humidity | 90 | 43200 | > th | dose independent | sin | 16 | NA |
| 525 | 202.08 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 528 | 202.12 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 547 | 202.32 | radiation | 1 | 4320 | > th | dose independent | sin | 16 | NA |
| 565 | 202.53 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 596 | 202.82 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 603 | 202.85 | radiation | 1 | 4320 | > th | dose independent | rect. | 16 | 14 |
| 619 | 202.92 | radiation | 1 | 4320 | > th | dose independent | rect. | 12 | 7 |
| 697 | 203.31 | radiation | 1 | 4320 | < th | dose independent | rect. | 16 | 14 |
| 732 | 203.51 | radiation | 20 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 775 | 203.74 | radiation | 1 | 4320 | < th | dose independent | sin | 15 | NA |
| 781 | 203.78 | humidity | 90 | 43200 | > th | dose dependent | rect. | 17 | 17 |
| 853 | 203.98 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 917 | 204.20 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 17 |