Os07g0663800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glucose/ribitol dehydrogenase family protein.
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Os07g0663800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glucose/ribitol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 282.1 | 0.789 | 9.93 | -3.76 | 2.13 | 2.85 | -2.92 | -0.455 | 0.613 | 0.193 | 1.168 | 15230 | 5.39 | -- |
| 281.19 | 0.781 | 9.93 | -3.78 | 2.32 | 3.07 | -2.61 | -- | 0.625 | 0.276 | 1.17 | 15223 | 4.52 | -- |
| 315.78 | 0.828 | 9.93 | -4.11 | 2.6 | 3.62 | -- | 0.132 | 0.545 | 0.702 | 1.167 | 15209 | 2.81 | -- |
| 315.84 | 0.828 | 9.93 | -3.94 | 2.5 | 3.4 | -- | -- | 0.571 | 0.527 | 1.17 | 15217 | 3.41 | -- |
| 594.79 | 1.14 | 9.93 | -4.23 | -- | 3.3 | -- | 0.551 | 0.193 | -- | 1.009 | 20090 | 3.7 | -- |
| 476.88 | 1.02 | 9.74 | -2.96 | 2.07 | -- | -2.76 | -- | 1.47 | 23.8 | -- | -- | -- | -- |
| 509.87 | 1.06 | 9.73 | -2.85 | 2.08 | -- | -- | -- | 1.48 | 23.8 | -- | -- | -- | -- |
| 579.72 | 1.12 | 9.94 | -4 | -- | 3.36 | -- | -- | 0.466 | -- | 0.87 | 15786 | 4.34 | -- |
| 624.43 | 1.16 | 10.1 | -- | 1.96 | 2.22 | -- | -- | 0.655 | 0.537 | 1.491 | 15193 | 6.3 | -- |
| 781.93 | 1.31 | 9.68 | -2.79 | -- | -- | -- | -- | 1.51 | -- | -- | -- | -- | -- |
| 724.21 | 1.26 | 9.66 | -- | 2.05 | -- | -- | -- | 1.8 | 23.7 | -- | -- | -- | -- |
| 655.29 | 1.19 | 9.94 | -- | -- | 3.76 | -- | -- | 1.21 | -- | 3.654 | 15342 | 9.08 | -- |
| 987.38 | 1.47 | 9.61 | -- | -- | -- | -- | -- | 1.82 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 280.73 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 2 | 280.78 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 7 | 280.99 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 18 | 281.05 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 23 | 283.78 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 24 | 283.78 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 33 | 284.54 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 66 | 285.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 8 |
| 70 | 285.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 71 | 285.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 78 | 285.87 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 82 | 285.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 104 | 287.03 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 107 | 287.11 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 109 | 287.11 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 125 | 287.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 10 |
| 226 | 290.36 | radiation | 1.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 230 | 290.54 | radiation | 1.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 231 | 290.58 | wind | 7.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 239 | 290.81 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 8 | 4 |
| 341 | 292.09 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 343 | 292.12 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 357 | 292.19 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 374 | 292.32 | wind | 7.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 377 | 292.41 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 389 | 292.71 | wind | 7.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 403 | 292.86 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 411 | 293.01 | wind | 7.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 446 | 293.43 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 453 | 293.73 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 488 | 294.16 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 10 |
| 493 | 294.35 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 7 |
| 506 | 294.62 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 10 |
| 511 | 294.75 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 9 |
| 572 | 295.57 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 574 | 295.58 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 580 | 295.69 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 7 |
| 607 | 296.22 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 9 |
| 660 | 296.97 | wind | 7.0 | 43200 | < th | dose independent | rect. | 23 | 13 |
| 663 | 297.02 | humidity | 90.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 664 | 297.04 | wind | 7.0 | 43200 | > th | dose independent | rect. | 23 | 13 |
| 727 | 297.62 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 765 | 298.33 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 0 | NA |
| 779 | 298.50 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 785 | 298.66 | humidity | 90.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 854 | 299.49 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 24 | 12 |
| 930 | 300.29 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 980 | 300.69 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 19 | 18 |