Os07g0663600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glucose/ribitol dehydrogenase family protein.
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Os07g0663600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glucose/ribitol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.68 | 0.59 | 8.1 | -2.46 | 0.778 | 2.82 | 0.0201 | -4.18 | -0.109 | 10 | 21.28 | 1386 | -- | -- |
| 172.23 | 0.611 | 7.97 | -1.26 | 0.816 | 2.68 | 0.28 | -- | 0.207 | 9.9 | 20.24 | 1403 | -- | -- |
| 157.4 | 0.584 | 8.1 | -2.47 | 0.762 | 2.79 | -- | -4.25 | -0.102 | 9.87 | 21.5 | 1407 | -- | -- |
| 171.76 | 0.61 | 7.96 | -1.22 | 0.746 | 2.59 | -- | -- | 0.214 | 9.9 | 20.6 | 1416 | -- | -- |
| 190.68 | 0.643 | 8.11 | -2.4 | -- | 2.74 | -- | -3.94 | -0.0804 | -- | 21.4 | 1480 | -- | -- |
| 389.02 | 0.925 | 7.82 | -0.277 | 0.708 | -- | 0.319 | -- | 0.842 | 8.68 | -- | -- | -- | -- |
| 389.34 | 0.924 | 7.82 | -0.266 | 0.706 | -- | -- | -- | 0.843 | 8.78 | -- | -- | -- | -- |
| 203.88 | 0.665 | 7.97 | -1.22 | -- | 2.53 | -- | -- | 0.241 | -- | 20.6 | 1490 | -- | -- |
| 207.04 | 0.67 | 7.92 | -- | 0.844 | 2.43 | -- | -- | 0.411 | 10.4 | 21.13 | 1320 | -- | -- |
| 417.6 | 0.955 | 7.83 | -0.265 | -- | -- | -- | -- | 0.848 | -- | -- | -- | -- | -- |
| 391.2 | 0.925 | 7.81 | -- | 0.705 | -- | -- | -- | 0.872 | 8.81 | -- | -- | -- | -- |
| 238.16 | 0.719 | 7.92 | -- | -- | 2.16 | -- | -- | 0.448 | -- | 21.3 | 1480 | -- | -- |
| 419.45 | 0.956 | 7.83 | -- | -- | -- | -- | -- | 0.878 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 14 | 156.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 18 |
| 25 | 157.51 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 91 | 160.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 19 |
| 102 | 161.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 174 | 162.33 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 177 | 162.36 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 209 | 162.84 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 229 | 163.50 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 15 |
| 236 | 163.72 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 240 | 163.76 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 254 | 164.11 | radiation | 1 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 269 | 164.28 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 281 | 164.52 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 287 | 164.64 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 7 |
| 290 | 164.66 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 11 |
| 312 | 164.92 | radiation | 1 | 4320 | < th | dose dependent | rect. | 9 | 21 |
| 317 | 164.99 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 330 | 165.04 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 339 | 165.13 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 343 | 165.14 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 12 |
| 346 | 165.16 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 351 | 165.18 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 9 |
| 352 | 165.19 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 4 |
| 364 | 165.26 | radiation | 1 | 4320 | < th | dose dependent | sin | 15 | NA |
| 399 | 165.78 | radiation | 1 | 4320 | < th | dose independent | rect. | 14 | 16 |
| 414 | 165.98 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 422 | 166.06 | radiation | 1 | 4320 | > th | dose independent | rect. | 15 | 15 |
| 430 | 166.14 | radiation | 1 | 4320 | < th | dose independent | rect. | 12 | 18 |
| 476 | 166.58 | radiation | 1 | 4320 | < th | dose independent | rect. | 8 | 22 |
| 481 | 166.60 | radiation | 1 | 4320 | > th | dose independent | sin | 15 | NA |
| 512 | 166.95 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 524 | 167.07 | radiation | 1 | 4320 | > th | dose independent | rect. | 8 | 22 |
| 542 | 167.18 | radiation | 1 | 4320 | < th | dose independent | sin | 15 | NA |
| 576 | 167.50 | wind | 7 | 43200 | > th | dose independent | rect. | 7 | 15 |
| 586 | 167.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 13 |
| 625 | 167.72 | wind | 7 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 647 | 167.86 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 730 | 168.17 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 734 | 168.18 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 18 |
| 743 | 168.22 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 764 | 168.26 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 768 | 168.29 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 815 | 168.47 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 18 |
| 849 | 168.63 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 11 |
| 867 | 168.70 | temperature | 25 | 1440 | < th | dose independent | rect. | 5 | 19 |
| 868 | 168.70 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 15 |
| 900 | 168.85 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |