Os07g0661800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nucleolar protein.
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Os07g0661800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nucleolar protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.32 | 0.461 | 6.69 | 0.0966 | 1.03 | -0.702 | 0.739 | -1.79 | 0.314 | 16.8 | 80.99 | 3249 | -- | -- |
| 100 | 0.466 | 6.69 | 0.213 | 1.06 | -0.851 | 0.4 | -- | 0.33 | 16.7 | 81.82 | 3227 | -- | -- |
| 97.49 | 0.46 | 6.69 | 0.116 | 1.02 | -0.746 | -- | -1.63 | 0.31 | 16.8 | 80.47 | 3161 | -- | -- |
| 100.39 | 0.467 | 6.68 | 0.198 | 1.05 | -0.916 | -- | -- | 0.349 | 16.8 | 82.99 | 3180 | -- | -- |
| 141.9 | 0.555 | 6.68 | 0.0685 | -- | -0.823 | -- | -1.42 | 0.289 | -- | 83.99 | 2689 | -- | -- |
| 114.3 | 0.501 | 6.68 | 0.14 | 0.986 | -- | 0.596 | -- | 0.341 | 16.7 | -- | -- | -- | -- |
| 115.23 | 0.503 | 6.68 | 0.143 | 0.99 | -- | -- | -- | 0.344 | 16.7 | -- | -- | -- | -- |
| 145.06 | 0.561 | 6.67 | 0.167 | -- | -0.994 | -- | -- | 0.314 | -- | 84.76 | 2680 | -- | -- |
| 101.38 | 0.469 | 6.68 | -- | 1.05 | -0.908 | -- | -- | 0.338 | 16.7 | 84 | 3188 | -- | -- |
| 167.17 | 0.604 | 6.67 | 0.106 | -- | -- | -- | -- | 0.318 | -- | -- | -- | -- | -- |
| 115.77 | 0.503 | 6.68 | -- | 0.987 | -- | -- | -- | 0.328 | 16.7 | -- | -- | -- | -- |
| 145.93 | 0.563 | 6.67 | -- | -- | -0.977 | -- | -- | 0.294 | -- | 85 | 2684 | -- | -- |
| 167.46 | 0.604 | 6.67 | -- | -- | -- | -- | -- | 0.306 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 95.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 3 | 95.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 4 | 95.59 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 5 | 95.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 6 | 95.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 8 | 95.93 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 9 | 95.93 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 10 | 96.02 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 12 | 96.60 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 15 | 96.74 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 16 | 96.75 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 18 | 96.76 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 22 | 96.79 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 24 | 96.85 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 13 |
| 26 | 96.85 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 13 |
| 27 | 96.96 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 30 | 96.99 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 31 | 97.00 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 13 |
| 33 | 97.02 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 34 | 97.03 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 35 | 97.03 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 36 | 97.06 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 40 | 97.14 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 41 | 97.17 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 43 | 97.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 48 | 97.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 51 | 97.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 53 | 97.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 54 | 97.32 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 67 | 97.42 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 69 | 97.42 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 21 |
| 70 | 97.45 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 11 |
| 86 | 97.48 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 88 | 97.50 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 98 | 97.55 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 13 |
| 103 | 97.60 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 106 | 97.61 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 107 | 97.61 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 108 | 97.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 109 | 97.61 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 113 | 97.64 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 114 | 97.64 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 120 | 97.68 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 128 | 97.68 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 134 | 97.68 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 135 | 97.69 | humidity | 60.0 | 14400 | < th | dose independent | sin | 21 | NA |
| 147 | 97.70 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 10 | 6 |
| 150 | 97.71 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 152 | 97.71 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 164 | 97.74 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 166 | 97.75 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 185 | 97.76 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 10 | 6 |
| 207 | 97.78 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 232 | 97.79 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 240 | 97.82 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 251 | 97.84 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 252 | 97.84 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 254 | 97.84 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 4 |
| 256 | 97.85 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 257 | 97.85 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 267 | 97.87 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |
| 340 | 97.89 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 342 | 97.89 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 385 | 97.93 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 386 | 97.93 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 10 | 7 |
| 390 | 97.93 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 398 | 97.95 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 403 | 97.95 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 5 |
| 414 | 97.97 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 438 | 97.99 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 10 | 22 |
| 450 | 98.01 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 451 | 98.01 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 491 | 98.03 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 501 | 98.04 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 22 |
| 505 | 98.05 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 511 | 98.05 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 7 | 12 |
| 523 | 98.05 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 14 | 22 |
| 526 | 98.06 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 21 |
| 564 | 98.07 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 565 | 98.07 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 22 | 19 |
| 590 | 98.08 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 630 | 98.11 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 635 | 98.11 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 14 |
| 642 | 98.11 | humidity | 70.0 | 14400 | < th | dose dependent | no | NA | NA |
| 710 | 98.12 | humidity | 60.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 735 | 98.13 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 776 | 98.15 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 18 |
| 786 | 98.16 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 23 |
| 791 | 98.17 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 792 | 98.17 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 828 | 98.19 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 13 |
| 878 | 98.21 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 904 | 98.22 | humidity | 60.0 | 14400 | > th | dose independent | no | NA | NA |
| 999 | 98.26 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |