Os07g0661500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DDT domain containing protein.
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Os07g0661500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DDT domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 198.76 | 0.662 | 3.24 | 0.777 | 0.419 | 1.62 | 0.454 | 3.1 | 0.324 | 8.83 | 25.26 | 12 | -- | -- |
| 202.5 | 0.663 | 3.28 | 0.44 | 0.408 | 1.89 | 0.617 | -- | 0.263 | 8.94 | 25.68 | 16 | -- | -- |
| 199.42 | 0.658 | 3.24 | 0.816 | 0.418 | 1.58 | -- | 3.28 | 0.329 | 9 | 25.23 | 12 | -- | -- |
| 203.77 | 0.665 | 3.28 | 0.455 | 0.41 | 1.89 | -- | -- | 0.265 | 8.81 | 25.65 | 16 | -- | -- |
| 209.07 | 0.677 | 3.26 | 0.797 | -- | 1.64 | -- | 3.12 | 0.327 | -- | 25.23 | 12 | -- | -- |
| 253.69 | 0.747 | 3.26 | 0.702 | 0.79 | -- | 0.898 | -- | 0.362 | 12.9 | -- | -- | -- | -- |
| 257.09 | 0.751 | 3.26 | 0.735 | 0.788 | -- | -- | -- | 0.367 | 12.9 | -- | -- | -- | -- |
| 212.92 | 0.68 | 3.29 | 0.494 | -- | 1.95 | -- | -- | 0.284 | -- | 25.7 | 10 | -- | -- |
| 208.89 | 0.673 | 3.3 | -- | 0.426 | 2 | -- | -- | 0.179 | 8.13 | 25.27 | 16 | -- | -- |
| 295.85 | 0.804 | 3.27 | 0.705 | -- | -- | -- | -- | 0.352 | -- | -- | -- | -- | -- |
| 271.31 | 0.77 | 3.28 | -- | 0.777 | -- | -- | -- | 0.285 | 12.8 | -- | -- | -- | -- |
| 218.22 | 0.688 | 3.3 | -- | -- | 2 | -- | -- | 0.217 | -- | 25.7 | 10 | -- | -- |
| 308.98 | 0.82 | 3.29 | -- | -- | -- | -- | -- | 0.274 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 196.33 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 5 | 196.59 | temperature | 25 | 10 | > th | dose dependent | rect. | 24 | 19 |
| 9 | 197.12 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 12 |
| 37 | 198.01 | temperature | 25 | 10 | > th | dose dependent | sin | 21 | NA |
| 55 | 198.57 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 20 |
| 86 | 198.96 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 93 | 198.99 | temperature | 10 | 10 | > th | dose dependent | sin | 22 | NA |
| 134 | 199.66 | temperature | 25 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 188 | 200.27 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 210 | 200.67 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 261 | 201.72 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 264 | 201.82 | temperature | 10 | 270 | > th | dose dependent | sin | 1 | NA |
| 296 | 202.28 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 316 | 202.57 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 3 |
| 485 | 204.95 | temperature | 30 | 90 | < th | dose independent | sin | 23 | NA |
| 515 | 205.39 | temperature | 30 | 90 | > th | dose independent | sin | 23 | NA |
| 538 | 205.91 | temperature | 30 | 270 | > th | dose independent | rect. | 8 | 8 |
| 571 | 206.10 | temperature | 30 | 270 | < th | dose independent | sin | 3 | NA |
| 585 | 206.31 | temperature | 30 | 270 | > th | dose independent | sin | 3 | NA |
| 642 | 207.46 | temperature | 30 | 30 | < th | dose independent | rect. | 1 | 23 |
| 701 | 208.41 | temperature | 30 | 90 | < th | dose independent | no | NA | NA |
| 706 | 208.43 | temperature | 25 | 90 | > th | dose dependent | rect. | 11 | 7 |
| 708 | 208.47 | temperature | 30 | 90 | > th | dose independent | no | NA | NA |
| 807 | 208.58 | temperature | 30 | 90 | < th | dose independent | rect. | 16 | 23 |
| 811 | 208.69 | temperature | 30 | 30 | < th | dose independent | rect. | 3 | 23 |
| 936 | 209.70 | temperature | 30 | 90 | > th | dose independent | rect. | 11 | 23 |
| 937 | 209.70 | temperature | 30 | 10 | < th | dose dependent | sin | 22 | NA |
| 956 | 210.03 | temperature | 30 | 90 | < th | dose independent | rect. | 13 | 23 |
| 964 | 210.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 994 | 210.25 | temperature | 30 | 30 | < th | dose independent | rect. | 9 | 23 |