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Os07g0661100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycosyl transferase, family 4 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0138) R2 : 0.0146
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0755 (0.0291) R2dN8 : 0.0188 R2N8 : 0.0146
σ : 0.26
deviance : 31.05
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.69 0.233 11.5 0.0908 0.252 0.141 0.232 1.07 0.0497 1.75 58 1223 -- --
25.6 0.236 11.5 0.149 0.261 0.313 0.187 -- 0.0397 1.71 54 1139 -- --
24.88 0.232 11.5 0.0847 0.251 0.132 -- 1.03 0.0495 1.91 57.49 1251 -- --
25.59 0.236 11.5 0.161 0.259 0.347 -- -- 0.0384 1.85 53 1195 -- --
28.28 0.248 11.5 0.105 -- 0.109 -- 0.847 0.0544 -- 56.91 1829 -- --
27.82 0.247 11.5 0.0924 0.221 -- 0.0852 -- 0.0818 1.91 -- -- -- --
27.85 0.247 11.5 0.0898 0.221 -- -- -- 0.0813 1.96 -- -- -- --
28.22 0.247 11.5 0.0777 -- 0.206 -- -- 0.086 -- 72 244 -- --
26.24 0.239 11.5 -- 0.259 0.304 -- -- 0.0282 1.85 52.79 1138 -- --
30.8 0.259 11.4 0.0989 -- -- -- -- 0.0864 -- -- -- -- --
28.06 0.248 11.5 -- 0.223 -- -- -- 0.0713 1.97 -- -- -- --
28.53 0.249 11.4 -- -- 0.197 -- -- 0.0857 -- 72 244 -- --
31.05 0.26 11.5 -- -- -- -- -- 0.0755 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.84 temperature 20 720 > th dose dependent rect. 23 9
48 23.25 temperature 20 720 > th dose dependent sin 8 NA
56 23.34 humidity 90 43200 < th dose independent rect. 20 7
58 23.35 humidity 90 43200 < th dose independent rect. 21 5
59 23.37 temperature 20 270 > th dose dependent rect. 1 16
60 23.38 humidity 90 43200 > th dose independent rect. 21 5
68 23.39 temperature 15 43200 < th dose dependent rect. 12 12
71 23.40 humidity 90 43200 < th dose independent rect. 18 12
72 23.40 temperature 30 720 < th dose dependent rect. 24 6
81 23.42 temperature 15 43200 < th dose dependent rect. 18 5
101 23.44 humidity 90 43200 > th dose independent rect. 23 2
103 23.44 temperature 15 43200 < th dose dependent sin 19 NA
105 23.44 temperature 15 43200 < th dose dependent rect. 21 1
124 23.47 temperature 15 43200 < th dose dependent rect. 10 3
143 23.48 temperature 15 43200 < th dose dependent rect. 10 10
146 23.48 humidity 80 43200 > th dose dependent rect. 11 19
185 23.51 temperature 15 43200 < th dose dependent rect. 18 1
222 23.52 temperature 10 720 > th dose dependent rect. 23 10
258 23.54 temperature 25 720 < th dose dependent rect. 3 2
273 23.54 humidity 80 43200 > th dose dependent rect. 17 9
279 23.54 humidity 80 43200 > th dose dependent rect. 21 18
283 23.55 humidity 80 43200 > th dose dependent sin 15 NA
324 23.57 humidity 90 43200 < th dose independent sin 12 NA
326 23.57 temperature 15 43200 < th dose independent rect. 12 3
345 23.58 temperature 15 43200 < th dose independent rect. 14 1
348 23.58 temperature 15 43200 < th dose dependent rect. 13 1
368 23.59 temperature 15 43200 > th dose independent rect. 12 2
374 23.59 humidity 80 43200 > th dose dependent rect. 18 7
377 23.59 humidity 80 43200 > th dose dependent rect. 16 11
432 23.62 temperature 15 43200 < th dose dependent rect. 6 1
445 23.62 temperature 10 270 > th dose dependent rect. 3 15
472 23.64 humidity 80 43200 > th dose dependent rect. 22 1
569 23.68 temperature 15 43200 > th dose independent rect. 11 10
608 23.69 temperature 15 43200 < th dose dependent no NA NA
640 23.70 temperature 15 43200 < th dose independent rect. 7 14
651 23.70 temperature 15 43200 < th dose dependent rect. 12 22
652 23.70 temperature 15 43200 < th dose dependent rect. 10 23
660 23.71 temperature 15 43200 < th dose independent sin 21 NA
673 23.71 temperature 15 43200 < th dose independent rect. 7 12
724 23.72 temperature 15 43200 < th dose independent rect. 7 9
733 23.72 temperature 15 43200 > th dose independent rect. 7 12
746 23.72 humidity 80 43200 > th dose dependent sin 6 NA
813 23.74 temperature 15 43200 > th dose independent sin 21 NA
815 23.74 humidity 90 43200 > th dose independent rect. 21 1
916 23.76 temperature 15 43200 < th dose independent rect. 6 2
917 23.76 temperature 15 43200 < th dose independent rect. 19 3
935 23.76 humidity 80 43200 > th dose dependent rect. 20 4
952 23.77 temperature 15 43200 > th dose independent rect. 18 1
953 23.77 temperature 15 43200 > th dose independent rect. 16 3
954 23.77 temperature 15 43200 > th dose independent rect. 18 3