Os07g0657400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF563 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0657400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF563 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.97 | 0.376 | 10 | 0.991 | 1.23 | -0.00251 | 0.0913 | 7.56 | 0.133 | 5.07 | 29.5 | 448 | -- | -- |
| 64.58 | 0.374 | 10.1 | 0.462 | 1.23 | 0.844 | -0.00251 | -- | 0.124 | 5.05 | 31.1 | 456 | -- | -- |
| 63.99 | 0.373 | 10 | 0.996 | 1.23 | -0.0131 | -- | 7.58 | 0.133 | 5.07 | 29.46 | 448 | -- | -- |
| 64.57 | 0.374 | 10.1 | 0.467 | 1.23 | 0.84 | -- | -- | 0.12 | 5.08 | 31.09 | 456 | -- | -- |
| 113.34 | 0.496 | 10 | 1.46 | -- | -0.888 | -- | 5.74 | 0.312 | -- | 24.83 | 499 | -- | -- |
| 76.54 | 0.41 | 10.1 | 0.556 | 1.02 | -- | -0.432 | -- | 0.0644 | 4.89 | -- | -- | -- | -- |
| 77.01 | 0.411 | 10.1 | 0.557 | 1.02 | -- | -- | -- | 0.0665 | 4.84 | -- | -- | -- | -- |
| 120.94 | 0.512 | 10.1 | 0.708 | -- | -0.631 | -- | -- | 0.162 | -- | 23.87 | 165 | -- | -- |
| 70.34 | 0.391 | 10.1 | -- | 1.24 | 0.902 | -- | -- | 0.0832 | 5.1 | 30.8 | 456 | -- | -- |
| 131.98 | 0.537 | 10.1 | 0.595 | -- | -- | -- | -- | 0.0929 | -- | -- | -- | -- | -- |
| 85.18 | 0.432 | 10.1 | -- | 1.03 | -- | -- | -- | 0.00443 | 4.82 | -- | -- | -- | -- |
| 131.04 | 0.533 | 10.1 | -- | -- | 0.464 | -- | -- | 0.122 | -- | 32.87 | 2703 | -- | -- |
| 141.32 | 0.555 | 10.1 | -- | -- | -- | -- | -- | 0.0269 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.35 | temperature | 30 | 270 | < th | dose independent | rect. | 9 | 15 |
| 9 | 63.58 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 11 | 63.67 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 14 | 63.76 | humidity | 50 | 270 | > th | dose independent | rect. | 9 | 14 |
| 21 | 64.04 | temperature | 30 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 22 | 64.06 | temperature | 30 | 270 | > th | dose dependent | sin | 15 | NA |
| 26 | 64.18 | temperature | 30 | 270 | > th | dose independent | sin | 16 | NA |
| 31 | 64.29 | temperature | 30 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 33 | 64.30 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 38 | 64.34 | temperature | 30 | 270 | > th | dose independent | rect. | 13 | 20 |
| 39 | 64.35 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 16 | 2 |
| 43 | 64.37 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 3 | 8 |
| 44 | 64.38 | temperature | 30 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 59 | 64.41 | temperature | 25 | 10 | > th | dose independent | rect. | 2 | 7 |
| 65 | 64.45 | temperature | 30 | 270 | > th | dose independent | rect. | 13 | 6 |
| 147 | 64.64 | temperature | 30 | 270 | > th | dose independent | rect. | 15 | 2 |
| 154 | 64.72 | temperature | 30 | 270 | < th | dose independent | sin | 15 | NA |
| 156 | 64.73 | temperature | 30 | 720 | > th | dose independent | rect. | 11 | 3 |
| 179 | 64.80 | temperature | 30 | 720 | > th | dose independent | rect. | 13 | 1 |
| 207 | 64.90 | temperature | 30 | 720 | > th | dose independent | rect. | 9 | 5 |
| 222 | 64.91 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 8 |
| 269 | 65.03 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 307 | 65.20 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 15 | 7 |
| 328 | 65.23 | humidity | 70 | 270 | < th | dose dependent | rect. | 15 | 2 |
| 336 | 65.27 | temperature | 20 | 90 | > th | dose dependent | rect. | 2 | 7 |
| 341 | 65.30 | temperature | 30 | 720 | > th | dose independent | sin | 4 | NA |
| 344 | 65.30 | humidity | 70 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 357 | 65.31 | humidity | 70 | 270 | < th | dose dependent | rect. | 14 | 5 |
| 362 | 65.31 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 9 |
| 375 | 65.35 | humidity | 60 | 270 | < th | dose independent | rect. | 13 | 6 |
| 392 | 65.37 | humidity | 60 | 270 | > th | dose independent | sin | 15 | NA |
| 403 | 65.43 | humidity | 70 | 270 | < th | dose dependent | sin | 14 | NA |
| 420 | 65.51 | wind | 1 | 90 | > th | dose independent | rect. | 3 | 6 |
| 468 | 65.56 | temperature | 30 | 720 | < th | dose independent | sin | 1 | NA |
| 480 | 65.61 | humidity | 60 | 270 | < th | dose independent | sin | 15 | NA |
| 481 | 65.61 | atmosphere | 995 | 10 | > th | dose independent | rect. | 9 | 8 |
| 482 | 65.62 | wind | 1 | 90 | > th | dose independent | rect. | 1 | 8 |
| 488 | 65.64 | temperature | 30 | 270 | > th | dose dependent | no | NA | NA |
| 596 | 65.65 | atmosphere | 995 | 90 | > th | dose independent | rect. | 9 | 7 |
| 627 | 65.75 | wind | 1 | 90 | > th | dose independent | rect. | 15 | 18 |
| 646 | 65.76 | temperature | 30 | 270 | < th | dose independent | rect. | 18 | 23 |
| 753 | 65.90 | wind | 1 | 270 | > th | dose independent | rect. | 3 | 15 |
| 807 | 65.97 | humidity | 70 | 270 | > th | dose independent | rect. | 17 | 10 |
| 846 | 66.02 | humidity | 50 | 270 | > th | dose independent | rect. | 7 | 23 |
| 847 | 66.02 | temperature | 30 | 720 | > th | dose dependent | sin | 1 | NA |
| 911 | 66.07 | atmosphere | 995 | 270 | > th | dose independent | rect. | 9 | 14 |
| 928 | 66.09 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 15 | 3 |