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Os07g0656900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Serine carboxypepsidase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.27 (0.0281) R2 : 0.606
β1 : 2.34 (0.108) R2dD : 0.473 R2D : 0.167
β2 : 0.798 (0.0698) R2dC : 0.114 R2C : 0.103
β3 : 2.31 (0.157) R2dE : 0.227 R2E : -0.0275
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.689 (0.0626) R2dN8 : 0.156 R2N8 : -0.0519
σ : 0.52
deviance : 124.42
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C
peak time of C : 15.3
E
wheather : radiation
threshold : 0.43
memory length : 1411
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
121.11 0.517 9.27 2.14 0.836 2.76 -0.502 2.16 0.697 14.9 0.4399 1430 -- --
123.83 0.518 9.27 2.35 0.801 2.31 -0.439 -- 0.688 15.3 0.44 1412 -- --
121.95 0.514 9.27 2.13 0.832 2.72 -- 2.05 0.694 14.9 0.4399 1429 -- --
124.42 0.52 9.27 2.34 0.798 2.31 -- -- 0.689 15.3 0.43 1411 -- --
151.56 0.573 9.29 2.12 -- 2.89 -- 2.16 0.668 -- 0.4344 1382 -- --
183.16 0.634 9.31 1.82 0.896 -- -0.186 -- 0.42 14.8 -- -- -- --
183.28 0.634 9.31 1.81 0.895 -- -- -- 0.419 14.8 -- -- -- --
154.48 0.579 9.27 2.36 -- 2.45 -- -- 0.687 -- 0.69 1372 -- --
249.63 0.736 9.28 -- 0.716 1.16 -- -- 0.406 14.7 1.17 1396 -- --
229.78 0.708 9.32 1.77 -- -- -- -- 0.396 -- -- -- -- --
269.84 0.768 9.36 -- 0.86 -- -- -- 0.217 14.7 -- -- -- --
274.37 0.771 9.28 -- -- 1.51 -- -- 0.399 -- 1.59 1358 -- --
312.8 0.826 9.36 -- -- -- -- -- 0.199 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 121.16 wind 7 43200 > th dose independent rect. 15 1
2 121.88 wind 7 43200 < th dose independent rect. 15 1
3 122.53 radiation 1 1440 < th dose dependent rect. 7 23
7 123.03 radiation 1 1440 < th dose dependent rect. 11 19
10 123.12 radiation 1 1440 < th dose dependent rect. 7 18
15 123.21 radiation 1 1440 < th dose dependent rect. 7 12
17 123.25 radiation 1 1440 < th dose dependent rect. 7 15
22 123.38 radiation 1 1440 < th dose dependent sin 22 NA
24 123.49 humidity 80 1440 < th dose independent rect. 7 13
29 123.91 temperature 25 1440 > th dose dependent rect. 11 8
33 123.98 humidity 80 1440 > th dose independent rect. 7 14
37 124.02 wind 7 43200 < th dose independent rect. 14 7
48 124.17 wind 7 43200 > th dose independent rect. 14 7
49 124.19 radiation 1 1440 < th dose dependent sin 16 NA
50 124.19 radiation 1 1440 < th dose dependent rect. 9 16
63 124.28 radiation 1 1440 < th dose dependent rect. 9 10
65 124.30 radiation 1 1440 < th dose dependent rect. 12 13
74 124.32 radiation 1 1440 < th dose dependent rect. 9 13
79 124.34 temperature 25 1440 > th dose dependent sin 20 NA
92 124.39 radiation 1 1440 < th dose dependent rect. 12 7
102 124.43 radiation 1 1440 < th dose dependent rect. 12 10
112 124.47 humidity 90 43200 > th dose independent rect. 21 1
142 124.64 wind 5 43200 > th dose dependent rect. 15 1
147 124.66 radiation 1 1440 < th dose dependent rect. 23 20
149 124.67 radiation 1 1440 < th dose dependent rect. 20 23
150 124.68 radiation 1 720 < th dose dependent rect. 5 18
155 124.69 radiation 1 1440 < th dose dependent rect. 5 20
161 124.70 radiation 1 1440 < th dose dependent no NA NA
179 124.73 radiation 1 1440 < th dose dependent rect. 5 14
220 124.80 wind 5 43200 > th dose dependent rect. 12 9
254 124.95 radiation 1 1440 < th dose dependent rect. 16 23
301 125.15 humidity 80 1440 < th dose independent sin 1 NA
326 125.25 wind 7 43200 > th dose independent rect. 14 4
371 125.47 humidity 80 1440 < th dose independent rect. 7 8
375 125.48 temperature 25 1440 > th dose dependent rect. 15 3
388 125.53 temperature 25 1440 > th dose dependent rect. 16 1
434 125.67 temperature 25 1440 > th dose dependent no NA NA
465 125.80 humidity 90 43200 < th dose independent rect. 21 1
496 125.95 wind 5 43200 > th dose dependent rect. 13 5
500 125.97 radiation 1 1440 < th dose independent rect. 11 19
539 126.20 radiation 1 1440 < th dose independent rect. 7 23
543 126.25 humidity 80 1440 > th dose independent sin 0 NA
602 126.72 radiation 1 1440 > th dose independent rect. 11 19
612 126.78 wind 7 43200 < th dose independent rect. 13 12
638 126.93 humidity 90 43200 > th dose dependent rect. 22 1
649 127.04 humidity 90 43200 > th dose dependent rect. 20 4
666 127.14 radiation 1 1440 > th dose independent rect. 7 23
668 127.15 wind 7 43200 > th dose independent rect. 13 12
719 127.48 wind 7 43200 < th dose independent sin 19 NA
737 127.61 wind 7 43200 < th dose independent rect. 5 16
743 127.64 wind 5 43200 > th dose dependent sin 19 NA
745 127.66 wind 9 43200 > th dose dependent rect. 19 2
774 127.81 wind 7 43200 > th dose independent rect. 5 16
799 127.99 wind 7 43200 > th dose independent sin 19 NA
855 128.31 wind 7 43200 > th dose independent rect. 13 17
870 128.41 wind 1 43200 > th dose dependent rect. 20 1
878 128.46 wind 9 43200 < th dose dependent rect. 20 1
883 128.49 humidity 80 1440 > th dose independent rect. 7 8
948 128.80 humidity 90 43200 < th dose independent rect. 18 7
991 129.00 radiation 1 1440 < th dose independent sin 22 NA