Os07g0656200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-glucosidase.
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Os07g0656200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-glucosidase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 176.37 | 0.624 | 7.68 | -2.98 | 0.592 | -4.75 | -0.384 | -5.27 | 0.0564 | 20.8 | 24.98 | 5024 | 2.78 | -- |
| 193.52 | 0.648 | 7.82 | -3.94 | 0.348 | -4.25 | -0.0042 | -- | -0.0996 | 20.5 | 29.68 | 5026 | 3.07 | -- |
| 176.8 | 0.619 | 7.68 | -2.99 | 0.594 | -4.73 | -- | -5.16 | 0.048 | 20.9 | 24.94 | 5023 | 2.88 | -- |
| 192.49 | 0.646 | 7.81 | -3.93 | 0.17 | -4.42 | -- | -- | -0.0807 | 22.8 | 32.89 | 5018 | 3.41 | -- |
| 181.45 | 0.627 | 7.67 | -3.14 | -- | -4.78 | -- | -3.92 | 0.123 | -- | 33.86 | 5074 | 3.38 | -- |
| 473.55 | 1.02 | 7.62 | -2.07 | 0.811 | -- | 0.0385 | -- | 0.848 | 21.7 | -- | -- | -- | -- |
| 473.55 | 1.02 | 7.62 | -2.07 | 0.811 | -- | -- | -- | 0.848 | 21.7 | -- | -- | -- | -- |
| 192.6 | 0.646 | 7.81 | -3.94 | -- | -4.6 | -- | -- | -0.0856 | -- | 35.3 | 5063 | 3.37 | -- |
| 471.35 | 1.01 | 7.59 | -- | 1.02 | -3.48 | -- | -- | 0.626 | 4.41 | 45.79 | 2330 | 7.53 | -- |
| 512.65 | 1.06 | 7.6 | -2.06 | -- | -- | -- | -- | 0.847 | -- | -- | -- | -- | -- |
| 586.61 | 1.13 | 7.57 | -- | 0.807 | -- | -- | -- | 1.08 | 21.5 | -- | -- | -- | -- |
| 472.51 | 1.01 | 7.64 | -- | -- | -3.03 | -- | -- | 0.576 | -- | 34 | 2274 | 5.6 | -- |
| 624.98 | 1.17 | 7.55 | -- | -- | -- | -- | -- | 1.08 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 164.09 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 11 | 164.43 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 13 | 164.43 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 16 | 164.46 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 17 | 164.46 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 21 | 164.72 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 23 | 164.77 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 6 |
| 114 | 168.66 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 115 | 168.75 | radiation | 1 | 43200 | < th | dose dependent | sin | 14 | NA |
| 143 | 169.65 | radiation | 1 | 43200 | < th | dose independent | sin | 15 | NA |
| 180 | 170.59 | radiation | 1 | 43200 | > th | dose independent | sin | 15 | NA |
| 198 | 171.11 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 19 |
| 219 | 171.37 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 21 |
| 227 | 171.52 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 11 |
| 230 | 171.53 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 18 |
| 233 | 171.54 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 234 | 171.54 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 16 |
| 301 | 172.21 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 20 |
| 326 | 172.43 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 339 | 172.51 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 21 |
| 346 | 172.61 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 11 |
| 372 | 172.98 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 10 |
| 375 | 173.02 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 13 |
| 537 | 173.87 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 547 | 173.99 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 568 | 174.12 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 578 | 174.14 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 21 |
| 609 | 174.26 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 22 |
| 621 | 174.29 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 636 | 174.43 | temperature | 20 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 651 | 174.50 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 692 | 174.84 | radiation | 1 | 43200 | < th | dose independent | rect. | 1 | 18 |
| 703 | 174.85 | radiation | 1 | 43200 | < th | dose independent | no | NA | NA |
| 713 | 174.85 | radiation | 1 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 753 | 175.02 | radiation | 1 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 809 | 175.38 | radiation | 1 | 43200 | > th | dose independent | no | NA | NA |
| 875 | 175.59 | radiation | 1 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 917 | 176.33 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 996 | 178.93 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 1000 | 179.10 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 7 |