Os07g0655500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Quinonprotein alcohol dehydrogenase-like domain containing protein.
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Os07g0655500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Quinonprotein alcohol dehydrogenase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.82 | 0.209 | 11.4 | 1.26 | 0.458 | 0.13 | -0.177 | -1.49 | 0.462 | 12.6 | 23.49 | 1725 | -- | -- |
| 22.59 | 0.221 | 11.5 | 0.961 | 0.477 | 0.288 | -0.255 | -- | 0.367 | 12 | 19.8 | 18711 | -- | -- |
| 19.57 | 0.206 | 11.4 | 1.22 | 0.457 | 0.118 | -- | -1.42 | 0.442 | 12.6 | 23 | 1845 | -- | -- |
| 21.39 | 0.215 | 11.5 | 0.961 | 0.47 | 0.414 | -- | -- | 0.346 | 12.5 | 12.6 | 17845 | -- | -- |
| 32.58 | 0.266 | 11.4 | 1.19 | -- | 0.135 | -- | -1.39 | 0.429 | -- | 22.6 | 1937 | -- | -- |
| 24.25 | 0.231 | 11.5 | 0.669 | 0.46 | -- | -0.171 | -- | 0.263 | 12.5 | -- | -- | -- | -- |
| 24.38 | 0.231 | 11.5 | 0.662 | 0.461 | -- | -- | -- | 0.262 | 12.5 | -- | -- | -- | -- |
| 34.52 | 0.274 | 11.5 | 0.997 | -- | 0.449 | -- | -- | 0.363 | -- | 12.59 | 18213 | -- | -- |
| 34.56 | 0.274 | 11.5 | -- | 0.415 | -0.16 | -- | -- | 0.169 | 12.6 | 20.02 | 3072 | -- | -- |
| 37.71 | 0.287 | 11.5 | 0.646 | -- | -- | -- | -- | 0.255 | -- | -- | -- | -- | -- |
| 35.94 | 0.28 | 11.5 | -- | 0.451 | -- | -- | -- | 0.189 | 12.5 | -- | -- | -- | -- |
| 38.96 | 0.291 | 11.5 | -- | -- | -0.421 | -- | -- | 0.192 | -- | 35 | 47520 | -- | -- |
| 48.72 | 0.326 | 11.5 | -- | -- | -- | -- | -- | 0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.46 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 2 | 19.50 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 15 | 15 |
| 3 | 19.51 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 13 |
| 10 | 19.56 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 14 | NA |
| 27 | 19.62 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 37 | 19.65 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 49 | 19.69 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 66 | 19.74 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 100 | 19.82 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 110 | 19.84 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 115 | 19.85 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 143 | 19.90 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 146 | 19.90 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 160 | 19.92 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 170 | 19.93 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 194 | 19.95 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 210 | 19.97 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 214 | 19.98 | temperature | 25.0 | 1440 | < th | dose independent | sin | 15 | NA |
| 215 | 19.98 | wind | 3.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 235 | 20.00 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 238 | 20.00 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 7 |
| 249 | 20.01 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 17 |
| 271 | 20.03 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 299 | 20.06 | humidity | 90.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 310 | 20.06 | temperature | 20.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 316 | 20.06 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 15 |
| 332 | 20.07 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 337 | 20.08 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 354 | 20.09 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 374 | 20.10 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 379 | 20.11 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 417 | 20.12 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 421 | 20.12 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 423 | 20.13 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 463 | 20.15 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 478 | 20.16 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 493 | 20.16 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 24 | 20 |
| 497 | 20.17 | temperature | 25.0 | 1440 | > th | dose independent | sin | 15 | NA |
| 501 | 20.17 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 524 | 20.18 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 10 | 19 |
| 527 | 20.18 | temperature | 25.0 | 720 | < th | dose dependent | sin | 8 | NA |
| 544 | 20.19 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 580 | 20.20 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 14 |
| 582 | 20.20 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 17 | 16 |
| 590 | 20.21 | wind | 3.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 619 | 20.22 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 621 | 20.22 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 624 | 20.22 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 670 | 20.24 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 715 | 20.26 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 733 | 20.26 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 17 |
| 771 | 20.28 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 803 | 20.29 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 825 | 20.30 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 863 | 20.31 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 16 |
| 891 | 20.32 | wind | 3.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 894 | 20.32 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |