Os07g0654100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0654100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.37 | 0.53 | 3.48 | -0.0145 | 0.534 | 0.836 | -0.173 | 3.18 | -0.0862 | 21.7 | 25.92 | 114 | -- | -- |
| 129.76 | 0.531 | 3.51 | -0.341 | 0.534 | 1.17 | -0.281 | -- | -0.137 | 21.8 | 26.7 | 122 | -- | -- |
| 127.43 | 0.526 | 3.47 | -0.0117 | 0.531 | 0.848 | -- | 3.32 | -0.0792 | 21.7 | 26.29 | 113 | -- | -- |
| 130.03 | 0.531 | 3.51 | -0.327 | 0.541 | 1.18 | -- | -- | -0.136 | 21.8 | 26.7 | 113 | -- | -- |
| 134.92 | 0.541 | 3.5 | -0.101 | -- | 1.12 | -- | 1.58 | -0.189 | -- | 24.3 | 493 | -- | -- |
| 151.15 | 0.576 | 3.51 | -0.173 | 0.678 | -- | -0.0541 | -- | -0.119 | 19.4 | -- | -- | -- | -- |
| 151.16 | 0.576 | 3.51 | -0.172 | 0.678 | -- | -- | -- | -0.119 | 19.4 | -- | -- | -- | -- |
| 134.29 | 0.54 | 3.52 | -0.399 | -- | 1.2 | -- | -- | -0.243 | -- | 24.4 | 523 | -- | -- |
| 132.81 | 0.537 | 3.5 | -- | 0.541 | 1.12 | -- | -- | -0.0932 | 21.5 | 26.95 | 113 | -- | -- |
| 175.69 | 0.619 | 3.5 | -0.183 | -- | -- | -- | -- | -0.13 | -- | -- | -- | -- | -- |
| 151.94 | 0.577 | 3.51 | -- | 0.68 | -- | -- | -- | -0.1 | 19.4 | -- | -- | -- | -- |
| 138.36 | 0.548 | 3.51 | -- | -- | 1.13 | -- | -- | -0.185 | -- | 24.6 | 515 | -- | -- |
| 176.57 | 0.62 | 3.49 | -- | -- | -- | -- | -- | -0.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.70 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 4 | 124.00 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 5 | 124.02 | temperature | 30.0 | 720 | > th | dose independent | rect. | 8 | 4 |
| 54 | 124.62 | temperature | 30.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 83 | 125.32 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 84 | 125.34 | temperature | 30.0 | 720 | > th | dose independent | sin | 7 | NA |
| 104 | 125.63 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 111 | 125.79 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 10 |
| 116 | 125.87 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 117 | 125.88 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 121 | 125.91 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 17 | 7 |
| 123 | 125.92 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 8 |
| 148 | 125.98 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 163 | 126.07 | temperature | 30.0 | 720 | < th | dose independent | rect. | 23 | 16 |
| 198 | 126.24 | atmosphere | 1000.0 | 43200 | < th | dose dependent | sin | 17 | NA |
| 217 | 126.28 | temperature | 30.0 | 720 | < th | dose independent | sin | 6 | NA |
| 234 | 126.32 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 10 | 17 |
| 258 | 126.41 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 17 | 20 |
| 272 | 126.45 | temperature | 25.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 329 | 126.55 | atmosphere | 1000.0 | 43200 | < th | dose dependent | no | NA | NA |
| 351 | 126.58 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 356 | 126.60 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 20 | 23 |
| 434 | 126.73 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 11 | 1 |
| 479 | 126.83 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 9 |
| 526 | 126.92 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 12 | 9 |
| 601 | 127.01 | atmosphere | 1000.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 603 | 127.02 | atmosphere | 1000.0 | 43200 | < th | dose independent | sin | 19 | NA |
| 627 | 127.05 | atmosphere | 1000.0 | 43200 | > th | dose independent | sin | 19 | NA |
| 721 | 127.15 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 778 | 127.22 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 833 | 127.26 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 878 | 127.29 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 880 | 127.30 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 887 | 127.30 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 3 | 18 |
| 888 | 127.30 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 910 | 127.31 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 15 | 22 |
| 923 | 127.32 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 15 | 20 |
| 925 | 127.32 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 15 | 20 |
| 930 | 127.32 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 15 | 22 |
| 948 | 127.34 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 969 | 127.34 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |