Os07g0653100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0653100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.37 | 0.5 | 11.3 | -1.13 | 0.243 | 1.06 | 1.06 | -0.949 | -0.529 | 20.2 | 22 | 773 | -- | -- |
| 114.74 | 0.499 | 11.3 | -0.907 | 0.32 | 1.14 | -0.341 | -- | -0.471 | 17 | 21.81 | 808 | -- | -- |
| 114.05 | 0.497 | 11.3 | -1.07 | 0.321 | 1.13 | -- | -0.557 | -0.516 | 17.6 | 21.9 | 797 | -- | -- |
| 114.84 | 0.499 | 11.3 | -0.904 | 0.332 | 1.13 | -- | -- | -0.467 | 17.6 | 21.84 | 820 | -- | -- |
| 118.97 | 0.508 | 11.3 | -1.09 | -- | 1.15 | -- | -0.545 | -0.511 | -- | 21.7 | 731 | -- | -- |
| 163.93 | 0.6 | 11.2 | -0.484 | 0.454 | -- | 0.617 | -- | -0.118 | 19.9 | -- | -- | -- | -- |
| 164.84 | 0.601 | 11.2 | -0.498 | 0.463 | -- | -- | -- | -0.116 | 19.4 | -- | -- | -- | -- |
| 119.91 | 0.51 | 11.3 | -0.928 | -- | 1.17 | -- | -- | -0.476 | -- | 21.7 | 734 | -- | -- |
| 133.58 | 0.538 | 11.3 | -- | 0.341 | 0.927 | -- | -- | -0.316 | 17.9 | 22.1 | 766 | -- | -- |
| 176.23 | 0.62 | 11.2 | -0.505 | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
| 171.36 | 0.612 | 11.2 | -- | 0.467 | -- | -- | -- | -0.0604 | 19.3 | -- | -- | -- | -- |
| 139.49 | 0.55 | 11.3 | -- | -- | 0.951 | -- | -- | -0.339 | -- | 22.1 | 726 | -- | -- |
| 182.96 | 0.631 | 11.2 | -- | -- | -- | -- | -- | -0.0674 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 21 |
| 14 | 116.48 | temperature | 15 | 270 | > th | dose dependent | sin | 6 | NA |
| 33 | 116.92 | temperature | 30 | 270 | < th | dose dependent | sin | 5 | NA |
| 39 | 117.09 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 22 |
| 49 | 117.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 61 | 117.33 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 62 | 117.33 | temperature | 25 | 720 | < th | dose dependent | rect. | 14 | 19 |
| 71 | 117.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 87 | 117.65 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 124 | 118.15 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 155 | 118.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 173 | 119.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 178 | 119.23 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 21 |
| 196 | 119.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 203 | 119.78 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 20 |
| 229 | 120.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 232 | 120.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 10 |
| 264 | 120.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 265 | 120.56 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 267 | 120.59 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 21 |
| 289 | 120.97 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 21 |
| 301 | 121.08 | wind | 9 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 307 | 121.10 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 362 | 121.66 | wind | 9 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 375 | 121.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 393 | 121.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 400 | 121.97 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 10 |
| 422 | 122.16 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 430 | 122.21 | wind | 9 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 448 | 122.34 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 460 | 122.40 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 489 | 122.65 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 490 | 122.65 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 499 | 122.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 13 |
| 530 | 122.96 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 538 | 123.00 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 539 | 123.00 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 13 |
| 563 | 123.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 7 |
| 571 | 123.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 590 | 123.37 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 10 |
| 619 | 123.50 | temperature | 25 | 1440 | < th | dose dependent | sin | 19 | NA |
| 630 | 123.56 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 635 | 123.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 651 | 123.65 | humidity | 80 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 652 | 123.66 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 661 | 123.72 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 684 | 123.82 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 23 |
| 689 | 123.83 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 714 | 123.95 | temperature | 20 | 720 | > th | dose independent | sin | 6 | NA |
| 724 | 123.98 | humidity | 80 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 731 | 124.02 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 752 | 124.12 | temperature | 20 | 720 | < th | dose independent | rect. | 9 | 22 |
| 765 | 124.19 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 21 |
| 776 | 124.26 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 10 |
| 811 | 124.39 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 22 |
| 822 | 124.43 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 16 |
| 860 | 124.60 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 893 | 124.70 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 23 |
| 947 | 124.90 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 950 | 124.90 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 992 | 125.08 | temperature | 20 | 720 | < th | dose independent | rect. | 14 | 23 |