Os07g0651600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to BLE2 protein.
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Os07g0651600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to BLE2 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 328.22 | 0.851 | 2.96 | 0.301 | 0.0558 | -1.47 | -0.462 | -7.2 | -0.00576 | 8.14 | 1015 | 1227 | -- | -- |
| 329.25 | 0.845 | 2.98 | 0.327 | 0.0386 | 1.95 | -0.384 | -- | 0.00102 | 9.26 | 1016 | 897 | -- | -- |
| 328.85 | 0.845 | 2.96 | 0.293 | 0.0587 | -1.44 | -- | -7.25 | -0.00589 | 7.42 | 1015 | 1226 | -- | -- |
| 329.64 | 0.846 | 2.98 | 0.308 | 0.0628 | 2.09 | -- | -- | -0.0026 | 6.93 | 1018 | 1102 | -- | -- |
| 329.03 | 0.845 | 2.96 | 0.289 | -- | -1.53 | -- | -7.45 | -0.00377 | -- | 1015 | 1226 | -- | -- |
| 340.55 | 0.865 | 2.99 | 0.214 | 0.0794 | -- | -0.638 | -- | -0.0317 | 9.74 | -- | -- | -- | -- |
| 342.09 | 0.866 | 2.99 | 0.189 | 0.0852 | -- | -- | -- | -0.0333 | 9.02 | -- | -- | -- | -- |
| 329.85 | 0.846 | 2.98 | 0.309 | -- | 2.09 | -- | -- | -0.0018 | -- | 1017 | 1116 | -- | -- |
| 332.07 | 0.849 | 2.99 | -- | 0.0664 | 1.93 | -- | -- | -0.0385 | 6.81 | 1017 | 1188 | -- | -- |
| 342.5 | 0.865 | 2.99 | 0.189 | -- | -- | -- | -- | -0.0327 | -- | -- | -- | -- | -- |
| 343.03 | 0.866 | 2.99 | -- | 0.0855 | -- | -- | -- | -0.0543 | 8.85 | -- | -- | -- | -- |
| 332.3 | 0.849 | 2.99 | -- | -- | 1.94 | -- | -- | -0.0375 | -- | 1017 | 1214 | -- | -- |
| 343.44 | 0.865 | 2.99 | -- | -- | -- | -- | -- | -0.0537 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 317.13 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 1 | 12 |
| 11 | 317.56 | temperature | 15.0 | 720 | > th | dose independent | rect. | 23 | 7 |
| 30 | 318.33 | temperature | 15.0 | 720 | > th | dose independent | rect. | 23 | 13 |
| 35 | 318.58 | temperature | 15.0 | 720 | > th | dose independent | rect. | 24 | 11 |
| 53 | 319.38 | temperature | 15.0 | 720 | > th | dose independent | rect. | 24 | 16 |
| 56 | 319.62 | temperature | 20.0 | 90 | < th | dose independent | rect. | 9 | 2 |
| 57 | 319.63 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 9 | 3 |
| 60 | 319.76 | temperature | 15.0 | 720 | > th | dose independent | rect. | 21 | 17 |
| 79 | 320.43 | temperature | 20.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 83 | 320.57 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 10 | 9 |
| 88 | 320.65 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 92 | 320.73 | temperature | 15.0 | 720 | > th | dose independent | rect. | 2 | 7 |
| 102 | 321.03 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 1 | 2 |
| 112 | 321.30 | temperature | 15.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 113 | 321.30 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 120 | 321.54 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 8 | 9 |
| 126 | 321.69 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 141 | 321.76 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 3 |
| 161 | 321.76 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 3 |
| 181 | 321.77 | temperature | 15.0 | 720 | > th | dose independent | rect. | 1 | 2 |
| 200 | 322.08 | temperature | 15.0 | 720 | > th | dose independent | rect. | 2 | 16 |
| 206 | 322.14 | precipitation | 0.1 | 10 | < th | dose independent | sin | 20 | NA |
| 207 | 322.14 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 20 | NA |
| 211 | 322.17 | temperature | 15.0 | 720 | < th | dose independent | rect. | 23 | 13 |
| 227 | 322.27 | temperature | 15.0 | 720 | < th | dose independent | rect. | 23 | 8 |
| 233 | 322.32 | temperature | 20.0 | 10 | < th | dose dependent | sin | 2 | NA |
| 235 | 322.33 | temperature | 15.0 | 720 | > th | dose independent | rect. | 4 | 8 |
| 269 | 322.68 | precipitation | 0.1 | 10 | > th | dose independent | sin | 20 | NA |
| 270 | 322.68 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 20 | NA |
| 281 | 322.70 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 10 | 9 |
| 292 | 322.80 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 301 | 322.86 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 17 |
| 315 | 322.97 | temperature | 15.0 | 720 | > th | dose independent | rect. | 24 | 19 |
| 316 | 322.97 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 6 | 3 |
| 331 | 323.02 | temperature | 15.0 | 720 | > th | dose independent | sin | 6 | NA |
| 363 | 323.14 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 5 | 5 |
| 395 | 323.39 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 8 | 8 |
| 404 | 323.47 | temperature | 15.0 | 720 | > th | dose independent | rect. | 21 | 10 |
| 407 | 323.50 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 410 | 323.52 | temperature | 15.0 | 720 | < th | dose independent | sin | 6 | NA |
| 414 | 323.55 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 5 |
| 442 | 323.78 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 16 |
| 451 | 323.82 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 465 | 323.94 | temperature | 15.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 554 | 324.31 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 570 | 324.36 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 6 |
| 574 | 324.38 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 585 | 324.42 | temperature | 15.0 | 720 | > th | dose independent | rect. | 14 | 22 |
| 615 | 324.56 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 7 |
| 617 | 324.56 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 7 |
| 640 | 324.73 | temperature | 15.0 | 720 | > th | dose independent | sin | 3 | NA |
| 781 | 325.12 | humidity | 90.0 | 270 | > th | dose independent | rect. | 11 | 2 |
| 809 | 325.20 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 11 | 2 |
| 817 | 325.24 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 15 |
| 838 | 325.33 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 898 | 325.54 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 9 | 18 |
| 905 | 325.57 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 11 |
| 920 | 325.60 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 969 | 325.68 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 983 | 325.74 | temperature | 15.0 | 720 | > th | dose independent | rect. | 19 | 14 |