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Os07g0647800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0141) R2 : 0.00494
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0446 (0.0296) R2dN8 : 0.00638 R2N8 : 0.00494
σ : 0.265
deviance : 32.27
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.15 0.206 12.7 -0.919 0.166 -0.304 0.227 -1.91 -0.0509 0.778 1.184 7189 -- --
20.12 0.209 12.7 -0.484 0.135 -0.274 0.204 -- 0.0998 0.68 10.11 18851 -- --
19.3 0.205 12.7 -0.92 0.164 -0.305 -- -1.92 -0.0503 0.317 1.22 7236 -- --
20 0.208 12.7 -0.47 0.137 -0.323 -- -- 0.117 0.216 10.6 21862 -- --
20.05 0.209 12.7 -0.928 -- -0.308 -- -2.15 -0.0492 -- 1.51 8946 -- --
23.39 0.227 12.7 -0.533 0.145 -- 0.13 -- -0.0162 0.355 -- -- -- --
23.45 0.227 12.7 -0.538 0.145 -- -- -- -0.0166 24 -- -- -- --
21.18 0.214 12.7 -0.459 -- -0.323 -- -- 0.116 -- 10.1 21902 -- --
24.9 0.232 12.7 -- 0.17 -0.353 -- -- 0.14 22.6 10.01 19588 -- --
24.78 0.233 12.7 -0.533 -- -- -- -- -0.0145 -- -- -- -- --
31.07 0.261 12.7 -- 0.138 -- -- -- 0.0433 23.8 -- -- -- --
25.52 0.235 12.7 -- -- -0.412 -- -- 0.221 -- 10 21903 -- --
32.27 0.265 12.7 -- -- -- -- -- 0.0446 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.87 wind 1.0 43200 < th dose dependent rect. 2 3
2 18.04 wind 1.0 43200 < th dose independent rect. 3 2
5 18.14 wind 1.0 43200 > th dose independent rect. 3 2
6 18.19 wind 1.0 43200 < th dose independent rect. 1 4
8 18.26 wind 1.0 43200 > th dose independent rect. 1 4
11 18.32 humidity 90.0 14400 > th dose independent rect. 5 1
14 18.41 humidity 90.0 14400 > th dose dependent rect. 1 9
16 18.47 humidity 90.0 14400 > th dose independent rect. 1 7
19 18.50 humidity 90.0 14400 > th dose independent rect. 3 4
31 18.57 humidity 90.0 14400 > th dose dependent rect. 3 5
36 18.60 precipitation 0.1 43200 > th dose independent rect. 7 1
39 18.61 precipitation 0.1 43200 > th dose dependent rect. 7 1
50 18.66 radiation 1.0 4320 > th dose independent rect. 18 1
67 18.69 precipitation 0.1 43200 < th dose independent rect. 7 1
69 18.69 precipitation 0.1 43200 < th dose dependent rect. 7 1
74 18.73 precipitation 0.1 43200 < th dose independent rect. 13 1
78 18.73 precipitation 0.1 43200 < th dose dependent rect. 13 1
83 18.76 humidity 80.0 43200 > th dose independent rect. 2 13
84 18.76 humidity 80.0 43200 < th dose independent rect. 2 13
85 18.76 humidity 90.0 14400 > th dose dependent sin 7 NA
92 18.78 humidity 90.0 14400 > th dose independent rect. 21 10
102 18.80 humidity 90.0 14400 < th dose independent rect. 5 2
106 18.81 humidity 80.0 43200 > th dose independent rect. 3 11
108 18.81 humidity 80.0 43200 > th dose independent rect. 1 15
110 18.81 precipitation 0.1 43200 > th dose dependent rect. 4 4
114 18.82 precipitation 0.1 43200 > th dose independent rect. 4 4
115 18.82 humidity 80.0 43200 < th dose independent rect. 1 15
118 18.83 precipitation 0.1 43200 > th dose independent rect. 13 1
119 18.83 precipitation 0.1 43200 < th dose independent rect. 4 4
121 18.83 precipitation 0.1 43200 < th dose dependent rect. 4 4
141 18.87 humidity 80.0 43200 < th dose independent rect. 3 11
151 18.89 humidity 90.0 14400 < th dose independent rect. 3 4
167 18.92 humidity 80.0 43200 > th dose independent rect. 24 17
171 18.93 radiation 1.0 43200 < th dose independent rect. 7 1
185 18.95 radiation 1.0 43200 > th dose independent rect. 7 1
194 18.95 temperature 25.0 43200 < th dose dependent rect. 15 1
195 18.95 humidity 90.0 43200 > th dose dependent rect. 9 1
210 18.97 radiation 1.0 4320 < th dose independent rect. 18 1
216 18.98 humidity 90.0 14400 < th dose independent rect. 1 7
217 18.98 humidity 80.0 43200 > th dose independent rect. 4 9
222 18.98 temperature 25.0 43200 < th dose dependent rect. 8 9
223 18.99 humidity 80.0 43200 > th dose independent sin 3 NA
227 18.99 radiation 1.0 43200 < th dose dependent rect. 7 1
238 19.00 radiation 1.0 4320 < th dose independent rect. 18 7
239 19.00 radiation 1.0 4320 < th dose independent rect. 18 9
241 19.00 temperature 25.0 43200 < th dose dependent rect. 9 1
252 19.01 humidity 80.0 43200 < th dose independent sin 3 NA
258 19.01 humidity 80.0 43200 > th dose dependent rect. 12 2
266 19.02 temperature 20.0 43200 < th dose independent rect. 19 1
284 19.03 temperature 25.0 43200 < th dose independent rect. 10 1
299 19.04 temperature 25.0 43200 > th dose independent rect. 10 1
306 19.04 humidity 90.0 43200 > th dose dependent rect. 8 3
323 19.05 temperature 20.0 43200 < th dose independent rect. 15 6
326 19.05 humidity 90.0 14400 > th dose dependent rect. 1 1
333 19.06 temperature 20.0 43200 > th dose independent rect. 18 1
342 19.06 precipitation 0.1 43200 > th dose dependent rect. 13 2
354 19.06 humidity 60.0 43200 > th dose dependent rect. 2 14
401 19.09 humidity 90.0 14400 > th dose independent sin 8 NA
402 19.09 temperature 25.0 43200 > th dose independent rect. 13 1
403 19.09 temperature 25.0 43200 < th dose independent rect. 13 1
405 19.09 temperature 25.0 43200 < th dose independent rect. 10 4
406 19.09 temperature 25.0 43200 > th dose independent rect. 9 5
449 19.10 temperature 20.0 43200 > th dose independent rect. 14 7
456 19.10 temperature 20.0 43200 > th dose independent rect. 12 13
460 19.10 temperature 25.0 43200 < th dose dependent sin 22 NA
465 19.10 precipitation 0.1 43200 > th dose dependent rect. 13 4
474 19.11 temperature 20.0 43200 > th dose independent sin 19 NA
476 19.11 temperature 20.0 43200 < th dose independent sin 19 NA
491 19.11 temperature 20.0 43200 > th dose independent rect. 14 11
640 19.14 temperature 20.0 43200 > th dose independent rect. 18 7
649 19.14 wind 1.0 43200 > th dose independent rect. 20 11
667 19.14 radiation 1.0 4320 < th dose dependent rect. 18 1
672 19.14 radiation 1.0 4320 < th dose dependent rect. 18 7
757 19.16 radiation 1.0 1440 < th dose dependent rect. 18 23
777 19.17 wind 1.0 43200 > th dose independent rect. 18 13
786 19.17 temperature 20.0 43200 > th dose independent rect. 4 18
860 19.19 radiation 1.0 43200 > th dose independent rect. 7 8
861 19.19 radiation 1.0 43200 < th dose independent rect. 7 8
865 19.19 wind 1.0 43200 < th dose independent rect. 20 11
885 19.19 temperature 20.0 43200 < th dose independent rect. 4 18
926 19.20 precipitation 0.1 43200 > th dose independent rect. 13 4
981 19.21 precipitation 0.1 43200 < th dose independent rect. 13 4