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Os07g0647400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : BSD domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0184) R2 : 0.103
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.28 (0.0387) R2dN8 : 0.133 R2N8 : 0.103
σ : 0.346
deviance : 54.92
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.14 0.2 10.7 0.91 0.371 0.105 -0.154 1.12 0.392 1.58 0.1696 4427 -- --
18.17 0.199 10.7 0.897 0.376 0.221 -0.126 -- 0.409 1.48 0.7757 19546 -- --
18.23 0.199 10.7 0.915 0.37 0.101 -- 1.12 0.392 1.6 0.18 4428 -- --
18.19 0.199 10.7 0.873 0.382 0.244 -- -- 0.408 1.65 0.6631 20038 -- --
26.29 0.239 10.7 0.953 -- -0.0618 -- 1.4 0.413 -- 0.1474 2941 -- --
19.43 0.207 10.7 0.99 0.374 -- -0.125 -- 0.383 1.61 -- -- -- --
19.49 0.207 10.7 0.994 0.375 -- -- -- 0.384 1.63 -- -- -- --
26.77 0.241 10.7 0.945 -- 0.276 -- -- 0.397 -- 0.5 2310 -- --
28.28 0.248 10.7 -- 0.4 0.575 -- -- 0.406 1.72 1.001 47520 -- --
28.06 0.248 10.7 1.01 -- -- -- -- 0.392 -- -- -- -- --
45.53 0.316 10.8 -- 0.393 -- -- -- 0.273 1.71 -- -- -- --
38.04 0.287 10.7 -- -- 0.571 -- -- 0.406 -- 1 47520 -- --
54.92 0.346 10.8 -- -- -- -- -- 0.28 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 16.71 wind 9.0 14400 > th dose independent rect. 10 1
2 16.71 wind 9.0 14400 < th dose independent rect. 10 1
6 16.87 wind 9.0 14400 > th dose dependent rect. 10 1
8 17.01 temperature 10.0 1440 > th dose independent rect. 6 4
11 17.01 atmosphere 995.0 1440 > th dose independent rect. 6 4
12 17.01 atmosphere 1015.0 1440 < th dose independent rect. 6 4
13 17.01 temperature 10.0 1440 > th dose independent rect. 10 20
22 17.14 humidity 80.0 90 > th dose independent rect. 5 8
24 17.14 humidity 60.0 90 > th dose dependent rect. 5 6
25 17.14 humidity 60.0 90 > th dose dependent rect. 5 12
27 17.17 humidity 80.0 90 > th dose independent rect. 5 10
30 17.18 humidity 70.0 90 > th dose dependent rect. 5 10
31 17.19 precipitation 0.1 4320 < th dose independent rect. 4 1
33 17.19 precipitation 0.1 4320 < th dose dependent rect. 4 1
34 17.19 humidity 90.0 1440 > th dose dependent rect. 8 6
35 17.19 humidity 70.0 90 > th dose dependent rect. 5 8
37 17.20 humidity 50.0 90 > th dose dependent rect. 5 4
40 17.22 humidity 90.0 1440 > th dose dependent rect. 8 1
43 17.23 radiation 30.0 90 < th dose independent rect. 5 6
47 17.26 precipitation 0.1 4320 > th dose independent rect. 4 1
48 17.27 radiation 30.0 90 < th dose independent rect. 5 4
50 17.28 temperature 30.0 90 < th dose independent rect. 5 4
57 17.29 wind 3.0 43200 < th dose dependent rect. 24 7
59 17.30 humidity 80.0 43200 < th dose independent rect. 5 2
65 17.31 humidity 70.0 90 > th dose independent rect. 5 4
66 17.31 wind 7.0 90 < th dose independent rect. 9 20
68 17.31 precipitation 0.1 4320 > th dose dependent rect. 4 1
69 17.31 radiation 40.0 90 < th dose dependent rect. 5 4
79 17.34 humidity 80.0 43200 > th dose independent rect. 5 2
80 17.34 wind 7.0 90 < th dose independent rect. 5 4
82 17.34 temperature 10.0 90 > th dose independent rect. 5 4
85 17.34 atmosphere 995.0 90 > th dose independent rect. 5 4
86 17.34 atmosphere 1015.0 90 < th dose independent rect. 5 4
88 17.34 temperature 10.0 90 > th dose independent rect. 9 20
95 17.35 precipitation 0.1 90 < th dose independent rect. 5 4
96 17.35 precipitation 0.1 90 < th dose dependent rect. 5 4
101 17.36 humidity 80.0 270 > th dose independent rect. 5 1
104 17.36 humidity 90.0 1440 > th dose independent rect. 8 6
105 17.36 wind 9.0 90 < th dose dependent rect. 5 4
110 17.37 radiation 1.0 720 < th dose independent rect. 5 10
111 17.37 radiation 40.0 10 < th dose independent rect. 5 19
114 17.37 wind 9.0 30 < th dose dependent rect. 20 9
117 17.38 precipitation 0.1 4320 > th dose independent rect. 2 15
118 17.38 precipitation 0.1 4320 < th dose independent rect. 2 15
121 17.38 radiation 10.0 270 < th dose dependent rect. 5 1
125 17.38 precipitation 0.1 4320 > th dose dependent rect. 2 15
126 17.38 precipitation 0.1 4320 < th dose dependent rect. 2 15
129 17.39 wind 1.0 43200 > th dose independent rect. 1 1
136 17.39 radiation 40.0 90 < th dose independent rect. 5 19
137 17.39 humidity 70.0 270 > th dose dependent rect. 5 1
138 17.39 wind 3.0 43200 < th dose dependent rect. 4 3
148 17.40 precipitation 0.1 14400 > th dose dependent rect. 17 1
151 17.40 temperature 10.0 90 > th dose dependent rect. 5 4
152 17.40 wind 3.0 43200 < th dose dependent rect. 3 5
157 17.41 precipitation 0.1 14400 > th dose independent rect. 17 1
160 17.41 atmosphere 1015.0 90 < th dose independent rect. 9 20
164 17.41 radiation 40.0 90 < th dose dependent rect. 5 6
166 17.41 humidity 90.0 1440 > th dose dependent rect. 7 12
169 17.42 humidity 90.0 1440 > th dose independent rect. 8 1
170 17.42 radiation 1.0 270 < th dose independent rect. 5 1
171 17.42 precipitation 0.1 14400 < th dose independent rect. 17 1
173 17.42 wind 5.0 30 < th dose independent rect. 20 9
174 17.42 precipitation 0.1 90 < th dose independent rect. 9 20
175 17.42 wind 9.0 270 < th dose independent rect. 6 23
177 17.42 precipitation 0.1 14400 < th dose dependent rect. 17 1
181 17.42 precipitation 0.1 90 < th dose dependent rect. 9 20
190 17.44 atmosphere 1010.0 270 < th dose independent rect. 5 1
192 17.44 humidity 90.0 1440 > th dose independent rect. 6 8
205 17.45 wind 3.0 43200 < th dose independent rect. 5 2
208 17.45 radiation 1.0 720 < th dose independent rect. 5 6
210 17.45 atmosphere 995.0 90 > th dose independent rect. 9 20
211 17.45 temperature 10.0 270 > th dose dependent rect. 5 1
218 17.46 humidity 50.0 90 > th dose independent rect. 5 14
222 17.46 wind 9.0 270 < th dose independent rect. 7 21
235 17.47 wind 1.0 30 > th dose independent rect. 5 4
246 17.47 humidity 60.0 30 > th dose independent rect. 5 19
256 17.48 precipitation 0.1 14400 < th dose independent rect. 15 1
257 17.48 wind 3.0 43200 > th dose independent rect. 5 3
263 17.48 humidity 90.0 1440 < th dose independent rect. 8 6
266 17.48 temperature 10.0 1440 > th dose independent rect. 21 9
269 17.48 temperature 30.0 1440 < th dose independent rect. 21 9
274 17.48 humidity 50.0 1440 > th dose independent rect. 21 9
280 17.48 atmosphere 995.0 1440 > th dose independent rect. 21 9
281 17.48 radiation 20.0 1440 < th dose independent rect. 21 9
290 17.48 temperature 10.0 1440 > th dose independent rect. 6 15
294 17.48 precipitation 0.1 14400 < th dose dependent rect. 15 1
303 17.48 humidity 50.0 90 > th dose dependent rect. 5 19
304 17.49 precipitation 0.1 14400 > th dose independent rect. 15 1
310 17.49 humidity 90.0 1440 > th dose independent rect. 6 11
315 17.49 precipitation 0.1 14400 > th dose dependent rect. 15 1
318 17.49 radiation 40.0 90 < th dose dependent rect. 5 8
322 17.50 wind 7.0 270 < th dose independent rect. 5 1
324 17.50 temperature 10.0 270 > th dose independent rect. 5 1
326 17.50 temperature 30.0 270 < th dose independent rect. 5 1
327 17.50 humidity 50.0 270 > th dose independent rect. 5 1
330 17.50 humidity 90.0 720 < th dose independent rect. 9 1
331 17.50 atmosphere 995.0 270 > th dose independent rect. 5 1
333 17.50 radiation 20.0 270 < th dose independent rect. 5 1
342 17.50 precipitation 0.1 4320 < th dose independent rect. 3 7
347 17.50 temperature 10.0 270 > th dose independent rect. 6 23
350 17.50 precipitation 0.1 4320 < th dose dependent rect. 3 7
355 17.50 precipitation 0.1 4320 > th dose dependent rect. 2 12
362 17.51 humidity 80.0 1440 > th dose independent rect. 10 1
363 17.51 precipitation 0.1 270 < th dose independent rect. 5 1
381 17.51 precipitation 0.1 4320 > th dose independent rect. 3 7
386 17.51 precipitation 0.1 270 < th dose dependent rect. 5 1
395 17.51 precipitation 0.1 4320 > th dose dependent rect. 3 7
400 17.52 precipitation 0.1 14400 > th dose independent rect. 19 1
401 17.52 precipitation 0.1 14400 < th dose independent rect. 19 1
411 17.52 humidity 50.0 90 > th dose independent rect. 14 10
413 17.52 precipitation 0.1 270 < th dose independent rect. 23 13
416 17.52 precipitation 0.1 14400 < th dose dependent rect. 19 1
425 17.52 radiation 40.0 270 < th dose dependent rect. 4 11
426 17.52 precipitation 0.1 270 < th dose dependent rect. 23 13
437 17.53 precipitation 0.1 14400 < th dose independent rect. 12 5
439 17.53 humidity 90.0 1440 < th dose independent rect. 6 8
448 17.53 precipitation 0.1 14400 < th dose dependent rect. 12 5
475 17.54 temperature 10.0 1440 > th dose independent rect. 1 5
478 17.54 temperature 30.0 1440 < th dose independent rect. 1 5
482 17.54 humidity 50.0 1440 > th dose independent rect. 1 5
492 17.54 atmosphere 995.0 1440 > th dose independent rect. 1 5
493 17.54 radiation 20.0 1440 < th dose independent rect. 1 5
502 17.54 precipitation 0.1 14400 > th dose independent rect. 12 5
507 17.54 precipitation 0.1 720 < th dose independent rect. 24 10
508 17.54 wind 7.0 270 < th dose independent rect. 16 11
510 17.54 temperature 10.0 1440 > th dose independent rect. 6 19
517 17.54 precipitation 0.1 14400 > th dose dependent rect. 19 1
527 17.54 precipitation 0.1 720 < th dose dependent rect. 24 10
531 17.55 wind 1.0 43200 < th dose independent rect. 1 1
536 17.55 humidity 90.0 1440 < th dose independent rect. 6 6
539 17.55 precipitation 0.1 14400 > th dose independent rect. 9 8
540 17.55 precipitation 0.1 14400 < th dose independent rect. 9 8
546 17.55 wind 9.0 270 < th dose dependent rect. 5 1
554 17.55 precipitation 0.1 14400 < th dose dependent rect. 9 8
556 17.55 radiation 30.0 720 < th dose dependent rect. 21 10
560 17.55 radiation 40.0 90 < th dose dependent rect. 5 19
576 17.56 precipitation 0.1 4320 < th dose independent rect. 3 5
585 17.56 temperature 15.0 270 > th dose independent rect. 12 11
587 17.56 humidity 50.0 270 > th dose independent rect. 3 14
591 17.56 precipitation 0.1 270 < th dose independent rect. 7 21
596 17.56 precipitation 0.1 4320 < th dose dependent rect. 3 5
599 17.56 precipitation 0.1 14400 > th dose dependent rect. 9 8
603 17.56 precipitation 0.1 270 < th dose dependent rect. 7 21
611 17.57 humidity 50.0 1440 > th dose independent rect. 6 3
617 17.57 temperature 30.0 90 < th dose independent rect. 5 6
620 17.57 radiation 20.0 270 < th dose independent rect. 3 6
622 17.57 wind 3.0 43200 < th dose independent rect. 1 7
629 17.57 wind 5.0 30 < th dose independent rect. 16 13
641 17.57 precipitation 0.1 14400 > th dose dependent rect. 12 5
649 17.57 precipitation 0.1 14400 > th dose dependent rect. 7 10
658 17.58 precipitation 0.1 4320 > th dose independent sin 4 NA
677 17.58 temperature 15.0 90 > th dose independent rect. 5 19
696 17.59 precipitation 0.1 4320 < th dose independent sin 4 NA
717 17.59 precipitation 0.1 4320 > th dose independent rect. 3 11
722 17.59 precipitation 0.1 4320 > th dose dependent sin 5 NA
723 17.59 precipitation 0.1 4320 < th dose dependent sin 4 NA
743 17.60 temperature 10.0 1440 > th dose independent rect. 6 6
746 17.60 atmosphere 995.0 1440 > th dose independent rect. 6 6
751 17.60 precipitation 0.1 14400 > th dose independent rect. 7 10
752 17.60 precipitation 0.1 4320 < th dose independent rect. 3 11
759 17.60 temperature 10.0 1440 > th dose independent rect. 12 18
763 17.60 wind 1.0 43200 > th dose dependent rect. 5 2
767 17.60 atmosphere 1015.0 90 < th dose dependent rect. 5 3
781 17.60 precipitation 0.1 4320 < th dose dependent rect. 3 11
804 17.61 radiation 40.0 90 < th dose independent rect. 5 11
805 17.61 atmosphere 1005.0 90 > th dose independent rect. 5 13
845 17.62 temperature 15.0 90 > th dose independent rect. 14 10
847 17.62 precipitation 0.1 14400 < th dose independent rect. 7 10
866 17.62 humidity 70.0 10 > th dose dependent rect. 6 7
870 17.62 precipitation 0.1 14400 < th dose dependent rect. 7 10
879 17.63 humidity 90.0 1440 > th dose independent sin 1 NA
883 17.63 wind 1.0 4320 > th dose independent rect. 17 2
903 17.63 wind 3.0 43200 > th dose independent rect. 1 8
913 17.63 temperature 15.0 270 > th dose independent rect. 2 22
976 17.64 temperature 10.0 270 > th dose independent rect. 23 13
978 17.64 atmosphere 995.0 270 > th dose independent rect. 23 13
979 17.64 atmosphere 1015.0 270 < th dose independent rect. 23 13
988 17.64 radiation 10.0 1440 < th dose dependent rect. 7 1