Os07g0647200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os07g0647200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 298.42 | 0.812 | 5.94 | 2.49 | 2.71 | 3.81 | 1.24 | -2.58 | 0.443 | 9.56 | 27.25 | 266 | -- | -- |
| 306.85 | 0.816 | 5.99 | 2.04 | 2.75 | 3.93 | 1.29 | -- | 0.34 | 9.54 | 26.74 | 256 | -- | -- |
| 303.93 | 0.812 | 5.94 | 2.57 | 2.73 | 3.83 | -- | -2.69 | 0.449 | 9.6 | 27.39 | 253 | -- | -- |
| 313.08 | 0.824 | 5.99 | 2.08 | 2.74 | 3.9 | -- | -- | 0.339 | 9.5 | 26.74 | 258 | -- | -- |
| 540.96 | 1.08 | 6.05 | 2.29 | -- | 5.5 | -- | -0.604 | 0.373 | -- | 32.11 | 598 | -- | -- |
| 529.23 | 1.08 | 6.17 | 1.02 | 3.07 | -- | 1.14 | -- | -0.527 | 8.41 | -- | -- | -- | -- |
| 533.31 | 1.08 | 6.17 | 1.06 | 3.07 | -- | -- | -- | -0.527 | 8.38 | -- | -- | -- | -- |
| 541.48 | 1.08 | 6.04 | 2.47 | -- | 5.69 | -- | -- | 0.444 | -- | 31.97 | 607 | -- | -- |
| 413.95 | 0.948 | 6.08 | -- | 2.81 | 3.04 | -- | -- | -0.0827 | 9 | 25.93 | 282 | -- | -- |
| 1056.07 | 1.52 | 6.25 | 1.07 | -- | -- | -- | -- | -0.496 | -- | -- | -- | -- | -- |
| 562.77 | 1.11 | 6.2 | -- | 3.07 | -- | -- | -- | -0.645 | 8.35 | -- | -- | -- | -- |
| 686.54 | 1.22 | 6.14 | -- | -- | 4.83 | -- | -- | 0.00399 | -- | 33.07 | 591 | -- | -- |
| 1086.53 | 1.54 | 6.28 | -- | -- | -- | -- | -- | -0.615 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 289.13 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 2 | 293.42 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 7 | 297.00 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 10 | 299.93 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 12 | 300.69 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 16 | 301.30 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 9 |
| 18 | 301.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 14 |
| 25 | 301.74 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 40 | 302.30 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 44 | 302.47 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 56 | 302.84 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 82 | 303.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 97 | 304.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 104 | 305.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 106 | 305.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 13 |
| 112 | 305.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 131 | 305.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 175 | 306.11 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 183 | 306.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 204 | 306.64 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 13 |
| 236 | 307.17 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 340 | 308.69 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 456 | 310.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 525 | 311.18 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 746 | 313.61 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 778 | 314.15 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 905 | 315.78 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 950 | 316.33 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 962 | 316.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 994 | 316.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 23 |