Os07g0647100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0647100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Armadillo-like helical domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.93 | 0.261 | 10.4 | -0.902 | 2.45 | 0.895 | -0.34 | 0.154 | -0.0212 | 16.2 | 21.38 | 483 | -- | -- |
| 30.92 | 0.259 | 10.4 | -0.893 | 2.45 | 0.825 | -0.341 | -- | -0.016 | 16.2 | 21.7 | 498 | -- | -- |
| 31.21 | 0.26 | 10.4 | -0.906 | 2.44 | 0.844 | -- | 0.111 | -0.0187 | 16.2 | 21.7 | 528 | -- | -- |
| 31.22 | 0.26 | 10.4 | -0.896 | 2.44 | 0.813 | -- | -- | -0.0162 | 16.2 | 21.75 | 531 | -- | -- |
| 315.92 | 0.832 | 10.5 | -1.28 | -- | -1.43 | -- | -1.28 | -0.421 | -- | 26.7 | 1119 | -- | -- |
| 37.24 | 0.286 | 10.4 | -1.08 | 2.42 | -- | -0.346 | -- | -0.111 | 16.1 | -- | -- | -- | -- |
| 37.57 | 0.287 | 10.4 | -1.08 | 2.42 | -- | -- | -- | -0.113 | 16.2 | -- | -- | -- | -- |
| 310.31 | 0.824 | 10.5 | -1.52 | -- | -1.51 | -- | -- | -0.495 | -- | 27.4 | 1128 | -- | -- |
| 43.79 | 0.308 | 10.4 | -- | 2.37 | 1.24 | -- | -- | 0.163 | 16.2 | 20.86 | 8124 | -- | -- |
| 355.44 | 0.881 | 10.4 | -1.18 | -- | -- | -- | -- | -0.177 | -- | -- | -- | -- | -- |
| 68.44 | 0.387 | 10.4 | -- | 2.44 | -- | -- | -- | 0.00798 | 16.1 | -- | -- | -- | -- |
| 342.47 | 0.862 | 10.4 | -- | -- | -1.79 | -- | -- | -0.242 | -- | 51.35 | 148 | -- | -- |
| 392.16 | 0.924 | 10.4 | -- | -- | -- | -- | -- | -0.0461 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.55 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 2 | 26.75 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 11 |
| 4 | 27.23 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 7 | 4 |
| 6 | 27.53 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 7 | 27.68 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 13 |
| 10 | 27.77 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 11 |
| 16 | 28.15 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 3 |
| 17 | 28.15 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 18 | 28.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 19 | 28.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 23 | 28.30 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 24 | 28.33 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 25 | 28.40 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 26 | 28.43 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 20 |
| 27 | 28.43 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 30 | 28.51 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 31 | 28.52 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 32 | 28.52 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 34 | 28.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 36 | 28.58 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 46 | 28.68 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 47 | 28.69 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 48 | 28.70 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 50 | 28.70 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 53 | 28.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 54 | 28.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 56 | 28.71 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 57 | 28.71 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 60 | 28.71 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 67 | 28.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 76 | 28.74 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 3 |
| 88 | 28.79 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 91 | 28.80 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 3 |
| 93 | 28.80 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 96 | 28.82 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 13 |
| 97 | 28.82 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 8 |
| 99 | 28.83 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 20 |
| 101 | 28.83 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 113 | 28.89 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 125 | 28.90 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 127 | 28.91 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 141 | 29.00 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 152 | 29.04 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 13 |
| 172 | 29.11 | temperature | 15.0 | 720 | > th | dose independent | rect. | 10 | 19 |
| 196 | 29.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 201 | 29.16 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 202 | 29.16 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 206 | 29.17 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 217 | 29.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 13 |
| 219 | 29.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 241 | 29.30 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 11 |
| 242 | 29.31 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 289 | 29.39 | temperature | 25.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 290 | 29.39 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 298 | 29.41 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 6 |
| 314 | 29.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 10 | 11 |
| 328 | 29.48 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 329 | 29.49 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 331 | 29.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 333 | 29.49 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 334 | 29.49 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 337 | 29.49 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 348 | 29.50 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 367 | 29.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 368 | 29.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 11 |
| 371 | 29.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 373 | 29.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 11 |
| 388 | 29.56 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 13 |
| 402 | 29.59 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 409 | 29.61 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 14 |
| 420 | 29.63 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 11 |
| 423 | 29.65 | temperature | 25.0 | 90 | < th | dose independent | rect. | 7 | 4 |
| 430 | 29.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 11 |
| 431 | 29.66 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 11 |
| 463 | 29.67 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 469 | 29.69 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 483 | 29.72 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 13 |
| 490 | 29.73 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 11 |
| 542 | 29.79 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 547 | 29.80 | temperature | 20.0 | 270 | < th | dose independent | rect. | 6 | 2 |
| 578 | 29.82 | wind | 1.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 660 | 29.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 11 |
| 675 | 29.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 11 |
| 679 | 29.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 11 |
| 680 | 29.93 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 13 |
| 756 | 30.02 | wind | 9.0 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 764 | 30.02 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 792 | 30.07 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 11 |
| 839 | 30.11 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 843 | 30.11 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 848 | 30.11 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 878 | 30.14 | humidity | 90.0 | 720 | < th | dose independent | rect. | 10 | 4 |
| 881 | 30.14 | radiation | 40.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 919 | 30.17 | temperature | 15.0 | 10 | > th | dose independent | rect. | 15 | 16 |
| 931 | 30.19 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 24 | 4 |
| 947 | 30.19 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 959 | 30.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 11 |
| 964 | 30.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 11 |
| 986 | 30.25 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 23 | 13 |
| 992 | 30.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 20 |