Os07g0645700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0645700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.79 | 0.401 | 12.2 | -1.07 | 0.927 | 0.729 | 0.235 | 2.2 | 0.372 | 0.62 | 0.04507 | 5369 | -- | -- |
| 75.99 | 0.406 | 12.2 | -1.01 | 0.908 | 0.994 | 0.252 | -- | 0.418 | 0.582 | 0.3582 | 5508 | -- | -- |
| 73.02 | 0.398 | 12.2 | -1.08 | 0.927 | 0.731 | -- | 2.2 | 0.37 | 0.614 | 0.04448 | 5369 | -- | -- |
| 76.04 | 0.406 | 12.2 | -1.02 | 0.938 | 1 | -- | -- | 0.397 | 0.64 | 0.3284 | 5490 | -- | -- |
| 126.38 | 0.524 | 12.2 | -1.04 | -- | 0.605 | -- | 2.54 | 0.382 | -- | 0.187 | 4962 | -- | -- |
| 99.48 | 0.468 | 12.3 | -0.736 | 0.94 | -- | 0.367 | -- | 0.278 | 0.691 | -- | -- | -- | -- |
| 100.06 | 0.468 | 12.3 | -0.75 | 0.939 | -- | -- | -- | 0.276 | 0.673 | -- | -- | -- | -- |
| 129.44 | 0.53 | 12.2 | -1.07 | -- | 1.1 | -- | -- | 0.4 | -- | 0.4073 | 5330 | -- | -- |
| 102.05 | 0.47 | 12.2 | -- | 0.905 | 0.758 | -- | -- | 0.483 | 0.594 | 0.183 | 6184 | -- | -- |
| 155.3 | 0.582 | 12.2 | -0.716 | -- | -- | -- | -- | 0.293 | -- | -- | -- | -- | -- |
| 114.87 | 0.501 | 12.2 | -- | 0.928 | -- | -- | -- | 0.36 | 0.635 | -- | -- | -- | -- |
| 152.34 | 0.575 | 12.2 | -- | -- | 0.751 | -- | -- | 0.548 | -- | 0.02798 | 15504 | -- | -- |
| 168.82 | 0.606 | 12.2 | -- | -- | -- | -- | -- | 0.372 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.23 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 1 | NA |
| 2 | 73.32 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 23 | NA |
| 3 | 73.32 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 23 | NA |
| 4 | 73.32 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 23 | NA |
| 8 | 73.38 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 13 | 73.65 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 14 | 73.72 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 15 |
| 15 | 73.72 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 15 |
| 17 | 73.74 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 15 |
| 20 | 73.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 23 | 73.89 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 24 | 73.89 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 6 |
| 25 | 73.89 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 6 |
| 32 | 73.95 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 8 |
| 34 | 73.95 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 8 |
| 39 | 74.01 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 8 |
| 42 | 74.01 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 8 |
| 45 | 74.04 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 8 |
| 55 | 74.08 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 10 |
| 58 | 74.08 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 10 |
| 60 | 74.09 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 6 |
| 95 | 74.21 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 18 |
| 100 | 74.26 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 22 |
| 104 | 74.31 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 107 | 74.33 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 111 | 74.34 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 116 | 74.36 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 15 |
| 142 | 74.41 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 22 |
| 160 | 74.47 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 164 | 74.48 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 10 |
| 172 | 74.52 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 173 | 74.53 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 184 | 74.54 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 190 | 74.56 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 222 | 74.58 | temperature | 30.0 | 1440 | < th | dose independent | sin | 6 | NA |
| 237 | 74.63 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 244 | 74.66 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 253 | 74.69 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 260 | 74.70 | temperature | 30.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 264 | 74.70 | precipitation | 0.1 | 4320 | > th | dose dependent | no | NA | NA |
| 265 | 74.70 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 23 |
| 266 | 74.70 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 277 | 74.71 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 23 |
| 297 | 74.73 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 23 |
| 300 | 74.74 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 20 |
| 303 | 74.75 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 315 | 74.76 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 18 |
| 322 | 74.78 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 12 |
| 326 | 74.78 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 343 | 74.87 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 349 | 74.88 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 9 |
| 368 | 74.90 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 396 | 74.92 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 16 |
| 451 | 75.00 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 467 | 75.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 13 |
| 469 | 75.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 15 |
| 494 | 75.05 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 525 | 75.11 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 610 | 75.22 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 20 |
| 627 | 75.24 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 20 |
| 629 | 75.24 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 20 |
| 764 | 75.39 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 771 | 75.39 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 1000 | 75.60 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 7 |