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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0644900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.46 (0.0318) R2 : 0.00357
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0855 (0.0669) R2dN8 : 0.00462 R2N8 : 0.00357
σ : 0.598
deviance : 164.25
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
153.3 0.582 3.45 0.199 0.475 -0.663 -0.269 0.899 -0.114 5.65 0.6 141 -- --
153.49 0.577 3.45 0.18 0.474 -0.581 -0.169 -- -0.112 5.61 0.4 140 -- --
153.32 0.577 3.45 0.197 0.478 -0.684 -- 0.783 -0.113 5.6 0.3786 140 -- --
153.56 0.577 3.45 0.18 0.476 -0.599 -- -- -0.113 5.57 0.3999 140 -- --
163.17 0.598 3.46 0.121 -- 0.344 -- -1.01 -0.0649 -- 0.3982 120 -- --
156.33 0.586 3.45 0.126 0.371 -- -0.388 -- -0.0808 5.79 -- -- -- --
156.69 0.586 3.45 0.123 0.369 -- -- -- -0.0793 5.68 -- -- -- --
158.03 0.585 3.45 0.00911 -- 0.436 -- -- -0.0606 -- 5.5 241 -- --
154.41 0.579 3.46 -- 0.472 -0.544 -- -- -0.128 5.55 0.4 141 -- --
163.77 0.598 3.45 0.135 -- -- -- -- -0.0705 -- -- -- -- --
157.1 0.586 3.45 -- 0.371 -- -- -- -0.0931 5.67 -- -- -- --
158.03 0.585 3.45 -- -- 0.437 -- -- -0.0623 -- 5.513 240 -- --
164.25 0.598 3.46 -- -- -- -- -- -0.0855 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 143.80 temperature 20.0 10 > th dose dependent rect. 2 2
2 144.31 atmosphere 1005.0 10 > th dose independent rect. 2 2
3 144.41 humidity 80.0 10 < th dose independent rect. 6 2
5 144.47 radiation 10.0 30 > th dose independent rect. 7 1
6 144.75 temperature 20.0 10 > th dose independent rect. 2 2
9 145.17 humidity 80.0 10 < th dose independent rect. 2 6
11 145.18 humidity 80.0 10 < th dose independent rect. 24 8
32 145.87 temperature 25.0 10 > th dose independent rect. 7 1
34 146.21 atmosphere 1000.0 10 > th dose dependent rect. 2 2
35 146.30 radiation 10.0 10 > th dose independent rect. 16 16
39 146.51 wind 3.0 10 < th dose dependent rect. 2 2
40 146.53 wind 9.0 4320 < th dose independent rect. 3 1
48 147.09 humidity 90.0 10 > th dose dependent rect. 2 2
53 147.12 wind 3.0 10 < th dose independent rect. 2 2
61 147.30 humidity 90.0 10 > th dose independent rect. 2 2
63 147.37 temperature 15.0 10 > th dose independent rect. 4 22
67 147.44 temperature 10.0 1440 > th dose independent rect. 3 1
70 147.44 temperature 30.0 1440 < th dose independent rect. 3 1
74 147.44 humidity 50.0 1440 > th dose independent rect. 3 1
83 147.44 atmosphere 995.0 1440 > th dose independent rect. 3 1
84 147.44 radiation 1.0 1440 < th dose independent rect. 3 1
104 147.44 temperature 10.0 1440 > th dose independent rect. 4 23
107 147.44 radiation 1.0 1440 < th dose dependent rect. 3 1
112 147.45 radiation 30.0 14400 < th dose dependent rect. 3 1
127 147.60 atmosphere 995.0 10 > th dose independent rect. 4 22
147 147.74 radiation 10.0 10 < th dose dependent rect. 4 22
149 147.76 precipitation 0.1 10 < th dose independent rect. 2 2
151 147.76 precipitation 0.1 10 < th dose dependent rect. 2 2
152 147.77 wind 3.0 90 < th dose independent rect. 2 1
154 147.83 temperature 25.0 10 < th dose independent rect. 2 2
161 148.01 humidity 80.0 90 > th dose dependent rect. 2 1
167 148.18 temperature 10.0 10 > th dose independent rect. 2 2
170 148.18 humidity 50.0 10 > th dose independent rect. 2 2
174 148.18 atmosphere 1010.0 10 < th dose independent rect. 2 2
176 148.18 radiation 1.0 10 < th dose independent rect. 2 2
182 148.18 radiation 1.0 10 < th dose dependent rect. 2 2
188 148.21 humidity 90.0 90 > th dose independent rect. 2 1
190 148.23 atmosphere 1015.0 1440 < th dose independent rect. 3 1
197 148.36 wind 1.0 90 > th dose independent rect. 2 1
202 148.41 precipitation 0.1 10 < th dose independent rect. 4 22
203 148.41 precipitation 0.1 10 < th dose dependent rect. 4 22
204 148.44 temperature 15.0 90 > th dose independent rect. 3 23
207 148.48 wind 9.0 10 < th dose independent rect. 4 22
215 148.57 wind 9.0 10 < th dose dependent rect. 13 15
233 148.85 wind 9.0 10 < th dose independent rect. 13 15
244 149.01 atmosphere 1015.0 10 < th dose independent rect. 13 15
245 149.02 temperature 10.0 10 > th dose independent rect. 4 9
247 149.02 atmosphere 995.0 10 > th dose independent rect. 4 9
248 149.02 atmosphere 1015.0 10 < th dose independent rect. 4 9
249 149.02 temperature 10.0 10 > th dose independent rect. 13 15
251 149.05 wind 9.0 10 < th dose independent rect. 4 9
254 149.09 precipitation 0.1 10 < th dose independent rect. 13 15
255 149.09 precipitation 0.1 10 < th dose dependent rect. 13 15
259 149.14 temperature 10.0 90 > th dose independent rect. 2 1
262 149.14 humidity 50.0 90 > th dose independent rect. 2 1
266 149.14 atmosphere 1010.0 90 < th dose independent rect. 2 1
268 149.14 radiation 1.0 90 < th dose independent rect. 2 1
274 149.14 radiation 1.0 90 < th dose dependent rect. 2 1
281 149.15 precipitation 0.1 10 < th dose independent rect. 4 9
283 149.15 precipitation 0.1 10 < th dose dependent rect. 4 9
288 149.24 humidity 90.0 10 > th dose independent rect. 24 4
318 149.39 atmosphere 1005.0 10 > th dose independent rect. 7 1
319 149.40 humidity 90.0 10 > th dose dependent rect. 24 4
323 149.45 radiation 10.0 30 < th dose independent rect. 4 22
335 149.55 wind 9.0 10 < th dose dependent rect. 15 13
349 149.62 wind 9.0 10 < th dose dependent rect. 4 9
371 149.82 humidity 50.0 10 > th dose independent rect. 13 15
373 149.83 radiation 40.0 10 < th dose independent rect. 4 22
374 149.83 temperature 20.0 10 > th dose dependent rect. 7 1
380 149.94 wind 1.0 10 > th dose independent rect. 2 2
435 150.33 radiation 40.0 10 < th dose independent rect. 4 8
438 150.36 atmosphere 1015.0 10 < th dose independent rect. 4 22
445 150.40 temperature 10.0 10 > th dose dependent rect. 13 15
457 150.49 wind 3.0 30 < th dose dependent rect. 4 9
467 150.54 atmosphere 1015.0 10 < th dose independent rect. 6 22
490 150.66 radiation 40.0 10 < th dose independent rect. 4 11
504 150.73 radiation 40.0 10 < th dose dependent rect. 14 14
510 150.75 humidity 90.0 10 < th dose dependent rect. 6 2
519 150.79 temperature 10.0 10 > th dose dependent rect. 4 9
525 150.82 wind 7.0 10 < th dose independent rect. 15 13
526 150.82 atmosphere 995.0 10 > th dose independent rect. 13 15
566 150.88 humidity 90.0 30 < th dose dependent rect. 3 5
567 150.89 wind 7.0 4320 > th dose independent rect. 1 1
573 150.89 wind 7.0 4320 > th dose dependent rect. 1 1
593 150.93 radiation 10.0 30 < th dose dependent rect. 4 7
600 150.94 wind 3.0 10 < th dose dependent rect. 6 22
602 150.95 wind 5.0 10 < th dose dependent rect. 7 1
623 151.02 humidity 50.0 10 > th dose independent rect. 4 9
627 151.02 wind 3.0 10 < th dose dependent rect. 20 8
631 151.03 atmosphere 1015.0 10 < th dose dependent rect. 4 2
635 151.04 wind 9.0 30 < th dose dependent rect. 4 22
636 151.05 wind 3.0 10 < th dose independent rect. 7 1
639 151.05 atmosphere 1015.0 10 < th dose independent rect. 15 13
646 151.08 wind 1.0 90 > th dose independent rect. 1 7
651 151.08 humidity 50.0 10 > th dose dependent rect. 4 9
661 151.11 wind 9.0 10 < th dose independent rect. 6 22
673 151.13 temperature 10.0 10 > th dose independent rect. 4 11
675 151.13 atmosphere 995.0 10 > th dose independent rect. 4 11
676 151.13 atmosphere 1015.0 10 < th dose independent rect. 4 11
677 151.13 temperature 10.0 10 > th dose independent rect. 15 13
681 151.14 wind 9.0 10 < th dose independent rect. 4 2
682 151.14 temperature 10.0 10 > th dose independent rect. 4 2
685 151.14 humidity 50.0 10 > th dose independent rect. 4 2
689 151.14 atmosphere 1010.0 10 < th dose independent rect. 4 2
691 151.14 radiation 20.0 10 < th dose independent rect. 4 2
694 151.14 temperature 10.0 10 > th dose independent rect. 6 22
695 151.14 precipitation 0.1 10 < th dose independent rect. 6 22
697 151.14 precipitation 0.1 10 < th dose dependent rect. 6 22
704 151.16 precipitation 0.1 10 < th dose independent rect. 15 13
705 151.16 radiation 30.0 30 < th dose independent rect. 13 15
708 151.16 precipitation 0.1 10 < th dose dependent rect. 15 13
710 151.17 radiation 40.0 10 < th dose independent rect. 15 13
713 151.18 atmosphere 1015.0 90 < th dose dependent rect. 2 1
715 151.18 humidity 50.0 10 > th dose dependent rect. 4 22
723 151.20 temperature 20.0 10 > th dose dependent rect. 4 4
730 151.21 humidity 80.0 10 > th dose dependent rect. 4 4
732 151.21 wind 9.0 10 < th dose dependent rect. 6 22
735 151.22 wind 9.0 10 < th dose independent rect. 4 11
739 151.23 wind 1.0 10 < th dose independent rect. 12 15
744 151.24 precipitation 0.1 10 < th dose independent rect. 4 11
749 151.24 precipitation 0.1 10 < th dose dependent rect. 4 11
785 151.28 radiation 10.0 30 > th dose independent rect. 12 20
788 151.28 radiation 40.0 10 < th dose dependent rect. 4 9
808 151.29 temperature 30.0 90 < th dose dependent rect. 2 1
810 151.29 radiation 40.0 10 < th dose dependent rect. 4 2
822 151.30 humidity 50.0 10 > th dose independent rect. 6 22
860 151.39 temperature 30.0 30 < th dose independent rect. 4 9
863 151.39 atmosphere 1015.0 10 < th dose dependent rect. 2 2
886 151.44 wind 1.0 10 < th dose independent rect. 17 10
894 151.45 radiation 10.0 30 < th dose independent rect. 4 6