Os07g0641700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 10 kDa chaperonin (Protein CPN10) (Protein groES).
FiT-DB / Search/ Help/ Sample detail
|
Os07g0641700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to 10 kDa chaperonin (Protein CPN10) (Protein groES).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.2 | 0.504 | 11.4 | 0.369 | 1.78 | -1.62 | 0.633 | -1.97 | 0.102 | 12.7 | 7.721 | 96 | 20.7 | -- |
| 119.65 | 0.509 | 11.4 | 0.402 | 1.77 | -1.63 | 0.88 | -- | 0.1 | 12.8 | 5.729 | 99 | 20.6 | -- |
| 116.8 | 0.503 | 11.4 | 0.38 | 1.76 | -1.6 | -- | -2.19 | 0.106 | 12.7 | 7.817 | 95 | 20.8 | -- |
| 123.03 | 0.517 | 11.4 | 0.427 | 1.74 | -1.72 | -- | -- | 0.103 | 12.7 | 5.637 | 99 | 20.6 | -- |
| 147.69 | 0.566 | 11.4 | 0.318 | -- | -2.14 | -- | -1.42 | 0.157 | -- | 16.13 | 89 | 3.47 | -- |
| 161.97 | 0.597 | 11.4 | 0.383 | 2.27 | -- | 1.21 | -- | 0.159 | 13.9 | -- | -- | -- | -- |
| 167.64 | 0.606 | 11.4 | 0.421 | 2.27 | -- | -- | -- | 0.166 | 13.9 | -- | -- | -- | -- |
| 150.85 | 0.572 | 11.5 | 0.431 | -- | -2.17 | -- | -- | 0.137 | -- | 25.19 | 78 | 3.77 | -- |
| 127.8 | 0.527 | 11.4 | -- | 1.74 | -1.7 | -- | -- | 0.0561 | 12.8 | 5.131 | 101 | 20.5 | -- |
| 478.42 | 1.02 | 11.5 | 0.327 | -- | -- | -- | -- | 0.114 | -- | -- | -- | -- | -- |
| 172.3 | 0.614 | 11.4 | -- | 2.26 | -- | -- | -- | 0.119 | 13.9 | -- | -- | -- | -- |
| 155.49 | 0.581 | 11.5 | -- | -- | -2.16 | -- | -- | 0.082 | -- | 24.59 | 89 | 3.86 | -- |
| 481.24 | 1.02 | 11.5 | -- | -- | -- | -- | -- | 0.0776 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.80 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 15 |
| 4 | 113.16 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 14 | 114.34 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 27 | 115.69 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 6 |
| 32 | 116.26 | radiation | 10 | 90 | < th | dose dependent | sin | 3 | NA |
| 33 | 116.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 44 | 117.71 | temperature | 10 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 47 | 118.02 | radiation | 1 | 270 | < th | dose dependent | sin | 5 | NA |
| 49 | 118.08 | radiation | 1 | 270 | < th | dose independent | sin | 6 | NA |
| 50 | 118.09 | radiation | 1 | 270 | > th | dose independent | sin | 6 | NA |
| 56 | 118.40 | temperature | 25 | 10 | > th | dose dependent | sin | 6 | NA |
| 76 | 119.28 | humidity | 70 | 10 | > th | dose dependent | rect. | 3 | 13 |
| 90 | 119.71 | radiation | 10 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 97 | 119.88 | temperature | 20 | 10 | > th | dose dependent | sin | 3 | NA |
| 103 | 120.06 | humidity | 70 | 10 | > th | dose dependent | sin | 3 | NA |
| 119 | 120.39 | radiation | 10 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 128 | 120.64 | temperature | 30 | 10 | < th | dose dependent | sin | 2 | NA |
| 187 | 121.45 | temperature | 10 | 10 | > th | dose dependent | sin | 3 | NA |
| 200 | 121.61 | radiation | 1 | 270 | < th | dose independent | rect. | 1 | 12 |
| 216 | 121.75 | radiation | 1 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 321 | 123.26 | humidity | 90 | 10 | < th | dose independent | rect. | 6 | 8 |
| 324 | 123.28 | wind | 9 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 405 | 124.26 | temperature | 25 | 90 | < th | dose independent | rect. | 2 | 17 |
| 408 | 124.27 | wind | 7 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 423 | 124.43 | temperature | 25 | 10 | > th | dose dependent | rect. | 20 | 16 |
| 428 | 124.47 | humidity | 80 | 10 | > th | dose independent | rect. | 3 | 13 |
| 434 | 124.52 | radiation | 1 | 270 | > th | dose independent | rect. | 5 | 6 |
| 459 | 124.62 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 9 |
| 480 | 124.90 | radiation | 1 | 270 | > th | dose independent | rect. | 17 | 22 |
| 497 | 125.02 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 6 |
| 602 | 125.78 | radiation | 10 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 676 | 126.20 | temperature | 25 | 10 | > th | dose dependent | rect. | 24 | 12 |
| 707 | 126.43 | humidity | 90 | 30 | < th | dose independent | sin | 2 | NA |
| 732 | 126.56 | temperature | 25 | 30 | > th | dose independent | rect. | 6 | 8 |
| 746 | 126.62 | radiation | 1 | 270 | < th | dose independent | rect. | 22 | 21 |
| 823 | 127.04 | temperature | 25 | 10 | > th | dose dependent | rect. | 20 | 18 |
| 870 | 127.31 | radiation | 20 | 10 | < th | dose dependent | rect. | 13 | 20 |
| 919 | 127.54 | wind | 9 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 921 | 127.55 | wind | 9 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 993 | 127.82 | humidity | 90 | 10 | < th | dose dependent | sin | 5 | NA |