Os07g0639800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Eukaryotic translation initiation factor 6 (Fragment).
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Os07g0639800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Eukaryotic translation initiation factor 6 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.07 | 0.163 | 12.6 | 0.4 | 0.563 | -0.86 | 0.452 | -0.0818 | 0.0519 | 18.1 | 10.43 | 321 | -- | -- |
| 12.07 | 0.162 | 12.6 | 0.413 | 0.562 | -0.86 | 0.438 | -- | 0.0556 | 18.1 | 9.306 | 333 | -- | -- |
| 12.47 | 0.164 | 12.6 | 0.447 | 0.558 | -0.85 | -- | 0.27 | 0.0656 | 18 | 9.373 | 317 | -- | -- |
| 12.52 | 0.165 | 12.6 | 0.405 | 0.559 | -0.844 | -- | -- | 0.0544 | 18 | 9.215 | 315 | -- | -- |
| 18.08 | 0.198 | 12.6 | 0.356 | -- | -0.647 | -- | -0.272 | 0.0252 | -- | 0.1312 | 1343 | -- | -- |
| 19.9 | 0.209 | 12.6 | 0.227 | 0.328 | -- | 0.292 | -- | -0.0678 | 18.7 | -- | -- | -- | -- |
| 20.12 | 0.21 | 12.6 | 0.223 | 0.33 | -- | -- | -- | -0.0669 | 18.6 | -- | -- | -- | -- |
| 18.09 | 0.198 | 12.6 | 0.426 | -- | -0.67 | -- | -- | 0.0492 | -- | 14.09 | 1340 | -- | -- |
| 16.4 | 0.189 | 12.6 | -- | 0.501 | -0.655 | -- | -- | -0.0154 | 18.1 | 8.651 | 309 | -- | -- |
| 25.78 | 0.237 | 12.6 | 0.215 | -- | -- | -- | -- | -0.0735 | -- | -- | -- | -- | -- |
| 21.43 | 0.217 | 12.6 | -- | 0.327 | -- | -- | -- | -0.0917 | 18.7 | -- | -- | -- | -- |
| 22.23 | 0.22 | 12.6 | -- | -- | -0.492 | -- | -- | -0.0247 | -- | 12.05 | 1324 | -- | -- |
| 27 | 0.243 | 12.6 | -- | -- | -- | -- | -- | -0.0973 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.39 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 3 | 11.51 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 12 | 11.99 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 17 |
| 15 | 12.00 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 22 |
| 19 | 12.01 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 23 |
| 21 | 12.03 | temperature | 15 | 720 | > th | dose dependent | sin | 15 | NA |
| 44 | 12.11 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 46 | 12.11 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 48 | 12.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 86 | 12.20 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 121 | 12.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 18 |
| 146 | 12.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 198 | 12.35 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 236 | 12.40 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 275 | 12.43 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 21 |
| 373 | 12.50 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 448 | 12.54 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 449 | 12.54 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 465 | 12.55 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 504 | 12.58 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 512 | 12.59 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 522 | 12.59 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 860 | 12.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 19 |
| 988 | 12.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 9 |
| 989 | 12.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 9 |