Os07g0639600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C15, pyroglutamyl peptidase I family protein.
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Os07g0639600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C15, pyroglutamyl peptidase I family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.31 | 0.298 | 11.4 | -0.645 | 0.561 | 0.318 | 0.147 | 1.63 | 0.0109 | 6.56 | 999.1 | 4961 | -- | -- |
| 41.01 | 0.298 | 11.4 | -0.689 | 0.57 | 0.368 | 0.18 | -- | 0.0227 | 6.52 | 1001 | 9780 | -- | -- |
| 40.37 | 0.296 | 11.4 | -0.643 | 0.562 | 0.322 | -- | 1.64 | 0.0102 | 6.56 | 999.1 | 4964 | -- | -- |
| 41.09 | 0.299 | 11.4 | -0.691 | 0.568 | 0.372 | -- | -- | 0.0194 | 6.52 | 1001 | 9790 | -- | -- |
| 56.81 | 0.351 | 11.4 | -0.661 | -- | 0.354 | -- | 1.71 | 0.0208 | -- | 998.9 | 5226 | -- | -- |
| 43.67 | 0.31 | 11.4 | -0.636 | 0.564 | -- | 0.164 | -- | -0.0111 | 6.56 | -- | -- | -- | -- |
| 43.74 | 0.31 | 11.4 | -0.634 | 0.565 | -- | -- | -- | -0.0116 | 6.55 | -- | -- | -- | -- |
| 57.87 | 0.354 | 11.4 | -0.675 | -- | 0.354 | -- | -- | 0.0295 | -- | 1001 | 9940 | -- | -- |
| 52.88 | 0.339 | 11.3 | -- | 0.558 | 0.206 | -- | -- | 0.11 | 6.6 | 1004 | 18381 | -- | -- |
| 60.36 | 0.363 | 11.4 | -0.62 | -- | -- | -- | -- | 2.02e-05 | -- | -- | -- | -- | -- |
| 54.32 | 0.345 | 11.4 | -- | 0.557 | -- | -- | -- | 0.059 | 6.62 | -- | -- | -- | -- |
| 69.22 | 0.388 | 11.4 | -- | -- | 0.193 | -- | -- | 0.116 | -- | 1004 | 18472 | -- | -- |
| 70.49 | 0.392 | 11.4 | -- | -- | -- | -- | -- | 0.0688 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.41 | humidity | 70.0 | 10 | > th | dose independent | rect. | 13 | 10 |
| 3 | 37.77 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 13 | 10 |
| 5 | 37.85 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 6 | 17 |
| 7 | 37.86 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 8 | 37.97 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 9 | 14 |
| 10 | 38.03 | radiation | 10.0 | 10 | < th | dose independent | rect. | 7 | 16 |
| 15 | 38.11 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 11 |
| 22 | 38.20 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 36 | 38.33 | radiation | 20.0 | 10 | < th | dose independent | rect. | 12 | 11 |
| 43 | 38.42 | temperature | 30.0 | 90 | < th | dose independent | rect. | 13 | 10 |
| 47 | 38.46 | humidity | 60.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 48 | 38.46 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 15 | 8 |
| 56 | 38.51 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 4 |
| 57 | 38.54 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 58 | 38.54 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 67 | 38.62 | temperature | 30.0 | 90 | < th | dose independent | rect. | 15 | 8 |
| 69 | 38.63 | humidity | 60.0 | 90 | > th | dose independent | rect. | 15 | 8 |
| 83 | 38.70 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 105 | 38.80 | radiation | 20.0 | 30 | < th | dose independent | rect. | 1 | 22 |
| 113 | 38.83 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 5 |
| 114 | 38.83 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 5 |
| 148 | 38.98 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 19 |
| 151 | 38.99 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 22 |
| 161 | 39.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 169 | 39.06 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 14 |
| 214 | 39.24 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 14 |
| 224 | 39.27 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 11 | 9 |
| 226 | 39.28 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 15 |
| 227 | 39.28 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 16 |
| 229 | 39.29 | humidity | 70.0 | 720 | < th | dose independent | rect. | 17 | 1 |
| 233 | 39.30 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 23 | 17 |
| 238 | 39.32 | wind | 9.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 239 | 39.32 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 247 | 39.34 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 252 | 39.34 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 258 | 39.35 | humidity | 70.0 | 10 | > th | dose independent | rect. | 1 | 22 |
| 276 | 39.39 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 293 | 39.42 | humidity | 70.0 | 720 | < th | dose independent | rect. | 16 | 3 |
| 301 | 39.44 | humidity | 90.0 | 720 | > th | dose independent | rect. | 11 | 2 |
| 303 | 39.44 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 329 | 39.47 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 19 |
| 330 | 39.47 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 16 | 7 |
| 340 | 39.49 | wind | 9.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 341 | 39.49 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 3 |
| 348 | 39.49 | radiation | 10.0 | 90 | < th | dose dependent | sin | 23 | NA |
| 352 | 39.50 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 362 | 39.50 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 374 | 39.52 | wind | 9.0 | 30 | < th | dose independent | rect. | 13 | 10 |
| 390 | 39.54 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 391 | 39.54 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 13 | 10 |
| 395 | 39.54 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 13 | 10 |
| 400 | 39.55 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 10 |
| 403 | 39.55 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 14 |
| 406 | 39.55 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 24 | 14 |
| 411 | 39.56 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 421 | 39.57 | radiation | 20.0 | 10 | < th | dose dependent | sin | 22 | NA |
| 434 | 39.58 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 444 | 39.60 | radiation | 20.0 | 270 | < th | dose independent | rect. | 11 | 9 |
| 454 | 39.61 | wind | 1.0 | 30 | > th | dose independent | rect. | 13 | 10 |
| 462 | 39.62 | temperature | 10.0 | 30 | > th | dose independent | rect. | 13 | 10 |
| 464 | 39.62 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 13 | 10 |
| 467 | 39.62 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 14 |
| 471 | 39.62 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 13 | 10 |
| 474 | 39.63 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 13 | 10 |
| 490 | 39.65 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 14 |
| 493 | 39.65 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 14 |
| 494 | 39.65 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 496 | 39.66 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 519 | 39.69 | temperature | 30.0 | 30 | < th | dose independent | rect. | 23 | 14 |
| 520 | 39.69 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 533 | 39.71 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 14 |
| 547 | 39.72 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 14 |
| 550 | 39.72 | temperature | 15.0 | 90 | > th | dose independent | rect. | 1 | 22 |
| 561 | 39.73 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 22 | 5 |
| 581 | 39.75 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 16 |
| 582 | 39.75 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 590 | 39.76 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 5 |
| 599 | 39.76 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 610 | 39.78 | radiation | 10.0 | 10 | < th | dose independent | sin | 22 | NA |
| 634 | 39.81 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 2 |
| 635 | 39.81 | radiation | 10.0 | 30 | < th | dose independent | rect. | 23 | 7 |
| 649 | 39.82 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 15 | 4 |
| 666 | 39.83 | humidity | 70.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 718 | 39.87 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 23 | 20 |
| 735 | 39.88 | humidity | 70.0 | 10 | > th | dose independent | rect. | 6 | 17 |
| 740 | 39.88 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 23 | 14 |
| 767 | 39.90 | wind | 1.0 | 30 | > th | dose independent | rect. | 1 | 22 |
| 769 | 39.90 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 23 | 14 |
| 770 | 39.91 | wind | 5.0 | 4320 | > th | dose independent | rect. | 16 | 6 |
| 771 | 39.91 | wind | 9.0 | 30 | < th | dose independent | rect. | 15 | 8 |
| 801 | 39.94 | humidity | 70.0 | 720 | < th | dose independent | sin | 13 | NA |
| 813 | 39.95 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 845 | 39.97 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 848 | 39.97 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 16 |
| 862 | 39.98 | humidity | 70.0 | 10 | > th | dose independent | rect. | 10 | 13 |
| 876 | 39.99 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 14 |
| 884 | 39.99 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 23 | 7 |
| 892 | 40.00 | wind | 9.0 | 4320 | < th | dose independent | rect. | 24 | 5 |
| 893 | 40.00 | wind | 1.0 | 30 | > th | dose independent | rect. | 15 | 8 |
| 900 | 40.00 | temperature | 30.0 | 90 | < th | dose independent | rect. | 1 | 22 |
| 909 | 40.01 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 5 |
| 912 | 40.01 | temperature | 10.0 | 30 | > th | dose independent | rect. | 15 | 8 |
| 914 | 40.01 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 15 | 8 |
| 916 | 40.01 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 15 | 8 |
| 918 | 40.01 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 16 |
| 919 | 40.01 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 16 |
| 931 | 40.01 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 15 | 8 |
| 945 | 40.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 4 |
| 948 | 40.02 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 4 |
| 952 | 40.02 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 4 |
| 958 | 40.02 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 4 |
| 959 | 40.02 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 4 |
| 985 | 40.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 17 |
| 986 | 40.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 20 |
| 995 | 40.03 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 15 | 8 |
| 998 | 40.03 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 16 |
| 1000 | 40.03 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 17 |