Os07g0635700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os07g0635700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 330.04 | 0.854 | 5.63 | 1.7 | 1.91 | 1.92 | 1.03 | 8.93 | 0.347 | 19.4 | 10.01 | 4775 | -- | -- |
| 358.73 | 0.882 | 5.89 | 0.00933 | 1.68 | 1.75 | 0.336 | -- | 0.143 | 19.3 | 27.31 | 1789 | -- | -- |
| 332.54 | 0.849 | 5.62 | 1.68 | 1.9 | 1.97 | -- | 9.12 | 0.35 | 19.4 | 10.12 | 4949 | -- | -- |
| 356.8 | 0.88 | 5.93 | -0.127 | 1.85 | 1.6 | -- | -- | -0.0282 | 19.5 | 25.76 | 1672 | -- | -- |
| 441.06 | 0.978 | 5.78 | 1.09 | -- | 3.31 | -- | 9.06 | -0.013 | -- | 14.59 | 554 | -- | -- |
| 439.88 | 0.983 | 5.9 | 0.406 | 1.96 | -- | 1.12 | -- | 0.093 | 19.5 | -- | -- | -- | -- |
| 443.32 | 0.986 | 5.9 | 0.379 | 1.96 | -- | -- | -- | 0.0943 | 19.5 | -- | -- | -- | -- |
| 422.11 | 0.957 | 5.93 | -0.227 | -- | 2.82 | -- | -- | -0.259 | -- | 23.84 | 593 | -- | -- |
| 357.08 | 0.88 | 5.92 | -- | 1.86 | 1.57 | -- | -- | -0.00683 | 19.5 | 25.9 | 1672 | -- | -- |
| 648.04 | 1.19 | 5.85 | 0.349 | -- | -- | -- | -- | 0.0638 | -- | -- | -- | -- | -- |
| 447.09 | 0.989 | 5.91 | -- | 1.95 | -- | -- | -- | 0.0522 | 19.5 | -- | -- | -- | -- |
| 423.33 | 0.958 | 5.92 | -- | -- | 2.78 | -- | -- | -0.22 | -- | 23.93 | 586 | -- | -- |
| 651.26 | 1.19 | 5.86 | -- | -- | -- | -- | -- | 0.0251 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 329.51 | temperature | 10 | 4320 | > th | dose dependent | rect. | 16 | 9 |
| 5 | 329.80 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 10 | 330.08 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 15 | 330.31 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 8 |
| 39 | 330.84 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 45 | 330.95 | temperature | 10 | 4320 | > th | dose dependent | sin | 16 | NA |
| 110 | 331.91 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 163 | 332.67 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 230 | 333.33 | temperature | 30 | 4320 | < th | dose dependent | sin | 15 | NA |
| 305 | 333.92 | temperature | 30 | 4320 | < th | dose dependent | rect. | 16 | 18 |
| 344 | 334.20 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 388 | 334.47 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 389 | 334.47 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 23 |
| 677 | 336.40 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 692 | 336.49 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 743 | 336.84 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 774 | 337.05 | temperature | 20 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 811 | 337.33 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |
| 869 | 337.81 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 23 |
| 984 | 338.66 | temperature | 20 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 996 | 338.78 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 17 |