Os07g0635500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450.
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Os07g0635500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome P450.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 460 | 1.01 | 4.04 | 1.43 | 1.08 | 6.3 | -0.539 | 12.1 | 0.466 | 12.2 | 8.343 | 361 | -- | -- |
| 467 | 1.01 | 3.98 | 1.48 | 1.16 | 3.64 | -0.894 | -- | 0.557 | 11.9 | 8.5 | 406 | -- | -- |
| 461.22 | 1 | 4.03 | 1.4 | 1.09 | 6.13 | -- | 11.3 | 0.463 | 12.1 | 8.304 | 360 | -- | -- |
| 465.22 | 1 | 3.99 | 1.28 | 1.08 | 3.68 | -- | -- | 0.455 | 12 | 8.6 | 406 | -- | -- |
| 533.23 | 1.08 | 4.06 | 1.38 | -- | 6.29 | -- | 11.1 | 0.449 | -- | 8.228 | 259 | -- | -- |
| 502.23 | 1.05 | 4.01 | 1.02 | 1.1 | -- | -0.551 | -- | 0.371 | 12.7 | -- | -- | -- | -- |
| 503.48 | 1.05 | 4.01 | 0.998 | 1.1 | -- | -- | -- | 0.367 | 12.7 | -- | -- | -- | -- |
| 537.26 | 1.08 | 4 | 1.24 | -- | 3.57 | -- | -- | 0.456 | -- | 8.6 | 352 | -- | -- |
| 504.23 | 1.05 | 4.03 | -- | 1.08 | 2.99 | -- | -- | 0.327 | 12.2 | 8.7 | 406 | -- | -- |
| 579.84 | 1.13 | 4.03 | 0.959 | -- | -- | -- | -- | 0.348 | -- | -- | -- | -- | -- |
| 529.73 | 1.08 | 4.03 | -- | 1.09 | -- | -- | -- | 0.256 | 12.6 | -- | -- | -- | -- |
| 575.26 | 1.12 | 4.03 | -- | -- | 2.85 | -- | -- | 0.307 | -- | 8.9 | 348 | -- | -- |
| 604.09 | 1.15 | 4.05 | -- | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 448.97 | wind | 5 | 90 | > th | dose dependent | sin | 16 | NA |
| 7 | 450.70 | wind | 7 | 90 | > th | dose independent | sin | 15 | NA |
| 9 | 451.85 | wind | 7 | 90 | > th | dose independent | rect. | 14 | 12 |
| 13 | 452.22 | wind | 5 | 90 | > th | dose dependent | rect. | 14 | 12 |
| 26 | 452.98 | wind | 7 | 90 | < th | dose independent | sin | 15 | NA |
| 179 | 457.76 | wind | 9 | 720 | < th | dose independent | rect. | 7 | 23 |
| 251 | 460.23 | wind | 9 | 720 | < th | dose independent | rect. | 7 | 14 |
| 262 | 460.47 | wind | 9 | 720 | < th | dose independent | rect. | 9 | 10 |
| 264 | 460.55 | wind | 9 | 90 | > th | dose independent | sin | 11 | NA |
| 341 | 462.24 | wind | 9 | 10 | < th | dose independent | sin | 11 | NA |
| 366 | 462.72 | wind | 9 | 10 | > th | dose independent | sin | 14 | NA |
| 445 | 463.28 | wind | 7 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 448 | 463.30 | wind | 7 | 270 | > th | dose dependent | no | NA | NA |
| 458 | 463.37 | wind | 9 | 720 | < th | dose independent | rect. | 2 | 17 |
| 467 | 463.40 | wind | 7 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 502 | 463.86 | wind | 5 | 90 | < th | dose independent | rect. | 9 | 12 |
| 682 | 465.23 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 7 |
| 797 | 465.75 | wind | 7 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 811 | 465.87 | wind | 9 | 720 | > th | dose dependent | rect. | 10 | 6 |
| 955 | 466.38 | wind | 9 | 720 | > th | dose independent | rect. | 10 | 6 |
| 972 | 466.46 | wind | 9 | 270 | > th | dose independent | no | NA | NA |