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Os07g0635300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.61 (0.0649) R2 : 0.799
β1 : 3.53 (0.459) R2dD : 0.241 R2D : 0.464
β2 : 2.01 (0.11) R2dC : 0.148 R2C : 0.155
β3 : -0.985 (0.289) R2dE : 0.0272 R2E : -0.00339
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 11.2 (2.23) R2dD*E : 0.131 R2D*E : 0.284
γ1 : 1.22 (0.0987) R2dN8 : 0.11 R2N8 : 0.0273
σ : 0.785
deviance : 284.31
__
_____
C
peak time of C : 6.05
E
wheather : temperature
threshold : 29.79
memory length : 4491
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
282.62 0.79 9.61 3.6 2.01 -1 -0.943 11.4 1.27 6.03 29.84 4494 -- --
300.01 0.813 9.35 5.69 1.96 0.276 -0.98 -- 1.47 6.14 18.5 12558 -- --
284.31 0.785 9.61 3.53 2.01 -0.985 -- 11.2 1.22 6.05 29.79 4491 -- --
301.24 0.808 9.33 5.78 1.99 0.306 -- -- 1.51 6.07 9.823 44557 -- --
485.56 1.03 9.43 5.32 -- 0.16 -- 4.64 1.43 -- 29.8 4872 -- --
301.23 0.814 9.35 5.62 1.96 -- -0.975 -- 1.45 6.09 -- -- -- --
303.56 0.816 9.35 5.62 1.96 -- -- -- 1.45 6.11 -- -- -- --
386.5 0.916 9.35 5.98 -- 1.46 -- -- 1.68 -- 27.5 477 -- --
466.75 1.01 9.72 -- 2 -4.06 -- -- -0.141 6.15 18.5 47520 -- --
502.45 1.05 9.38 5.67 -- -- -- -- 1.5 -- -- -- -- --
1134.66 1.58 9.49 -- 2.04 -- -- -- 0.829 5.97 -- -- -- --
664.73 1.2 9.75 -- -- -4.12 -- -- -0.135 -- 18.53 47520 -- --
1350.79 1.72 9.53 -- -- -- -- -- 0.869 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 272.41 wind 1 43200 > th dose independent rect. 22 1
2 272.97 wind 1 43200 < th dose independent rect. 22 1
3 274.67 radiation 20 1440 > th dose dependent rect. 16 1
19 275.49 wind 1 43200 < th dose dependent rect. 22 1
21 275.62 humidity 70 270 < th dose independent rect. 15 2
24 276.83 wind 1 43200 > th dose independent rect. 20 3
42 277.86 humidity 80 10 < th dose independent rect. 15 5
43 277.89 humidity 80 90 < th dose independent rect. 15 5
45 277.96 radiation 10 270 < th dose dependent rect. 19 22
54 278.39 radiation 30 43200 > th dose independent rect. 15 17
56 278.56 radiation 40 43200 > th dose independent rect. 14 2
73 278.68 atmosphere 995 43200 < th dose dependent rect. 17 8
74 278.70 radiation 20 30 < th dose independent rect. 20 16
75 278.70 radiation 20 30 < th dose independent rect. 20 18
78 278.76 atmosphere 995 43200 < th dose independent rect. 18 7
81 278.95 atmosphere 995 43200 < th dose dependent rect. 15 15
83 278.96 atmosphere 995 43200 > th dose independent rect. 18 9
85 279.00 humidity 80 30 < th dose independent rect. 8 13
92 279.17 atmosphere 995 43200 < th dose dependent rect. 18 5
93 279.22 wind 1 43200 > th dose independent rect. 17 6
94 279.33 humidity 90 270 < th dose dependent rect. 15 2
95 279.33 atmosphere 995 43200 < th dose dependent rect. 16 10
96 279.45 wind 1 43200 > th dose independent rect. 17 10
98 279.48 radiation 10 43200 > th dose independent rect. 15 3
113 279.55 humidity 60 4320 < th dose dependent rect. 15 1
115 279.58 humidity 80 90 < th dose independent rect. 6 14
120 279.72 wind 1 14400 < th dose dependent rect. 1 2
125 279.82 wind 1 14400 < th dose independent rect. 2 1
126 279.82 humidity 70 270 > th dose independent rect. 11 13
134 280.07 humidity 70 270 < th dose independent rect. 15 16
135 280.10 humidity 60 43200 > th dose independent rect. 16 18
143 280.27 wind 1 43200 < th dose independent rect. 17 10
144 280.32 humidity 60 4320 < th dose dependent rect. 14 3
145 280.33 wind 1 43200 < th dose independent rect. 20 4
159 280.50 humidity 60 43200 < th dose independent rect. 16 18
180 280.56 humidity 50 270 > th dose dependent rect. 10 13
186 280.62 humidity 70 270 < th dose independent rect. 14 18
200 280.64 atmosphere 995 720 > th dose independent rect. 9 7
232 280.92 humidity 60 43200 < th dose independent rect. 15 20
236 281.05 atmosphere 995 720 > th dose independent rect. 4 17
240 281.06 humidity 80 4320 < th dose dependent rect. 20 1
268 281.12 temperature 25 4320 > th dose dependent rect. 20 1
301 281.27 temperature 30 4320 > th dose independent rect. 14 1
308 281.33 radiation 30 4320 < th dose independent rect. 15 16
312 281.36 humidity 80 270 > th dose independent rect. 9 8
322 281.50 humidity 60 43200 < th dose dependent rect. 14 2
323 281.51 humidity 60 43200 > th dose independent rect. 16 1
325 281.52 atmosphere 995 43200 > th dose independent sin 11 NA
331 281.55 radiation 20 4320 > th dose independent rect. 15 16
334 281.57 temperature 30 4320 < th dose independent rect. 14 20
335 281.59 wind 1 43200 < th dose independent rect. 17 7
339 281.63 temperature 30 4320 < th dose independent rect. 14 9
340 281.64 temperature 30 4320 < th dose independent rect. 14 7
344 281.65 radiation 20 1440 > th dose independent rect. 16 1
365 281.66 temperature 30 4320 < th dose independent rect. 14 15
366 281.66 radiation 40 10 < th dose dependent rect. 20 19
367 281.67 temperature 25 270 > th dose independent rect. 15 1
368 281.67 temperature 30 4320 < th dose independent rect. 14 1
374 281.69 humidity 60 43200 > th dose independent sin 11 NA
377 281.70 wind 1 43200 < th dose dependent rect. 19 2
378 281.71 temperature 30 4320 < th dose independent rect. 14 12
380 281.72 atmosphere 995 43200 < th dose independent sin 11 NA
382 281.72 temperature 30 4320 < th dose independent rect. 14 3
385 281.73 wind 1 14400 > th dose independent rect. 2 1
390 281.74 atmosphere 995 43200 > th dose independent rect. 19 3
396 281.77 radiation 30 4320 < th dose independent rect. 15 2
398 281.77 radiation 30 4320 < th dose independent rect. 15 10
399 281.78 radiation 30 4320 < th dose independent rect. 15 12
423 281.84 humidity 60 43200 < th dose independent sin 11 NA
439 281.92 humidity 80 90 > th dose independent rect. 4 22
445 281.94 temperature 30 4320 > th dose independent rect. 14 20
452 281.97 atmosphere 1000 270 > th dose independent rect. 10 13
454 281.97 wind 1 43200 < th dose dependent rect. 17 7
459 281.99 temperature 30 4320 > th dose independent rect. 14 5
474 281.99 humidity 90 270 < th dose dependent rect. 6 13
479 282.02 atmosphere 995 43200 < th dose independent rect. 21 1
491 282.02 atmosphere 995 43200 < th dose dependent rect. 21 1
511 282.06 atmosphere 995 720 > th dose independent rect. 1 15
513 282.07 atmosphere 995 43200 > th dose independent rect. 23 1
552 282.18 humidity 70 43200 < th dose dependent rect. 17 17
568 282.27 wind 1 43200 < th dose dependent rect. 20 4
570 282.30 radiation 10 43200 > th dose independent sin 14 NA
580 282.37 radiation 10 14400 < th dose independent rect. 17 1
620 282.42 humidity 70 90 > th dose dependent rect. 5 21
623 282.44 temperature 25 270 > th dose independent rect. 14 3
630 282.50 humidity 60 43200 < th dose dependent rect. 13 21
670 282.61 radiation 10 14400 < th dose independent rect. 17 8
677 282.63 wind 1 43200 > th dose independent rect. 20 7
678 282.63 radiation 10 14400 < th dose independent rect. 17 10
683 282.64 atmosphere 995 43200 < th dose dependent sin 14 NA
711 282.73 humidity 70 270 > th dose dependent rect. 9 8
735 282.79 humidity 60 43200 < th dose independent rect. 15 2
736 282.79 humidity 70 4320 > th dose independent rect. 16 15
737 282.80 humidity 70 4320 > th dose independent rect. 16 9
738 282.80 humidity 70 4320 > th dose independent rect. 16 11
744 282.81 wind 9 90 > th dose dependent rect. 13 7
746 282.83 humidity 70 4320 > th dose independent rect. 16 7
763 282.87 radiation 10 43200 < th dose dependent rect. 7 3
774 282.90 temperature 25 4320 > th dose dependent rect. 18 14
795 282.92 temperature 30 4320 < th dose independent rect. 18 22
824 282.99 temperature 25 4320 > th dose independent rect. 6 1
826 282.99 temperature 30 4320 < th dose independent rect. 4 12
829 282.99 temperature 30 4320 < th dose independent rect. 1 15
831 283.00 temperature 30 4320 < th dose independent rect. 9 7
837 283.02 temperature 30 4320 < th dose independent sin 15 NA
841 283.02 humidity 90 10 < th dose dependent rect. 16 4
852 283.04 temperature 30 4320 < th dose independent rect. 22 18
869 283.06 radiation 10 270 > th dose independent rect. 15 1
879 283.09 atmosphere 995 720 > th dose independent rect. 9 22
885 283.10 humidity 60 43200 < th dose dependent rect. 12 10
952 283.17 temperature 30 4320 > th dose independent rect. 18 22
954 283.17 radiation 10 270 < th dose dependent rect. 9 7
963 283.20 temperature 25 4320 < th dose independent rect. 6 1
975 283.23 temperature 30 4320 > th dose independent rect. 10 6
999 283.27 atmosphere 995 720 > th dose independent rect. 11 20