Os07g0634900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Myb, DNA-binding domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0634900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Myb, DNA-binding domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 795.16 | 1.32 | 4.57 | -3.33 | 0.281 | 4.33 | 0.14 | -10.1 | -0.837 | 3.71 | 0.9753 | 306 | 3.98 | 0.831 |
| 812.09 | 1.33 | 4.48 | -2.77 | 0.341 | 3.46 | 0.31 | -- | -0.715 | 3.46 | 0.9191 | 195 | 4 | 0.883 |
| 776.69 | 1.3 | 4.58 | -3.45 | 0.178 | 4.39 | -- | -10.6 | -0.829 | 2.57 | 0.9381 | 311 | 3.98 | 0.5 |
| 788.14 | 1.31 | 4.5 | -2.67 | 0.281 | 3.54 | -- | -- | -0.73 | 3.11 | 0.9999 | 220 | 3.92 | 0.523 |
| 778.64 | 1.3 | 4.59 | -3.49 | -- | 4.53 | -- | -11.4 | -0.829 | -- | 0.9451 | 303 | 3.98 | 0.495 |
| 970.25 | 1.46 | 4.54 | -2.6 | 1.05 | -- | 0.915 | -- | -1.06 | 5.13 | -- | -- | -- | -- |
| 972.35 | 1.46 | 4.54 | -2.6 | 1.06 | -- | -- | -- | -1.07 | 5.18 | -- | -- | -- | -- |
| 786.61 | 1.31 | 4.51 | -2.87 | -- | 3.34 | -- | -- | -0.832 | -- | 0.9769 | 220 | 3.95 | 0.528 |
| 991.66 | 1.47 | 4.45 | -- | 0.234 | 3.9 | -- | -- | -0.573 | 3.96 | 0.9682 | 219 | 3.93 | 0.367 |
| 1031.03 | 1.5 | 4.55 | -2.57 | -- | -- | -- | -- | -1.04 | -- | -- | -- | -- | -- |
| 1151.14 | 1.59 | 4.47 | -- | 1.01 | -- | -- | -- | -0.775 | 5.27 | -- | -- | -- | -- |
| 992.21 | 1.47 | 4.45 | -- | -- | 4.03 | -- | -- | -0.569 | -- | 0.9769 | 225 | 3.93 | 0.333 |
| 1204.88 | 1.62 | 4.49 | -- | -- | -- | -- | -- | -0.754 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 799.81 | wind | 1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 2 | 807.57 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 5 | 820.92 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 20 | 825.19 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 21 | 825.32 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 22 | 825.87 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 34 | 825.98 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 35 | 826.10 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 36 | 826.16 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 70 | 830.66 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 79 | 832.92 | humidity | 70 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 92 | 833.18 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 109 | 836.12 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 125 | 837.42 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 7 |
| 126 | 837.54 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 5 |
| 147 | 840.14 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 6 |
| 148 | 840.19 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 152 | 840.37 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 156 | 840.51 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 205 | 842.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 210 | 844.69 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 11 |
| 214 | 844.80 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 239 | 845.23 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 246 | 845.41 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 17 |
| 403 | 847.91 | humidity | 90 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 407 | 848.19 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 13 |
| 428 | 848.96 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 429 | 849.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 467 | 849.94 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 471 | 849.97 | wind | 3 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 518 | 850.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 546 | 851.01 | wind | 3 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 591 | 852.07 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 3 |
| 609 | 852.62 | radiation | 30 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 649 | 853.31 | humidity | 90 | 90 | > th | dose independent | rect. | 4 | 1 |
| 650 | 853.37 | temperature | 20 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 651 | 853.43 | temperature | 30 | 1440 | > th | dose dependent | sin | 12 | NA |
| 703 | 854.24 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 784 | 856.91 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 859 | 858.03 | temperature | 20 | 90 | > th | dose independent | rect. | 4 | 1 |