Os07g0634100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0634100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.06 | 0.329 | 3.04 | -0.467 | 0.197 | 0.278 | -0.532 | -1.22 | -0.0367 | 22.9 | 26.2 | 779 | -- | -- |
| 50.44 | 0.331 | 3 | -0.166 | 0.223 | 0.203 | -0.711 | -- | 0.0645 | 22.7 | 26.6 | 787 | -- | -- |
| 50.03 | 0.329 | 3.05 | -0.523 | 0.192 | 0.282 | -- | -1.54 | -0.0599 | 22.6 | 26 | 791 | -- | -- |
| 52.82 | 0.338 | 3.01 | -0.127 | 0.227 | 0.171 | -- | -- | 0.0601 | 22.4 | 25.7 | 706 | -- | -- |
| 51.86 | 0.335 | 3.06 | -0.546 | -- | 0.402 | -- | -1.52 | -0.0864 | -- | 25.9 | 785 | -- | -- |
| 51.55 | 0.337 | 3 | -0.105 | 0.302 | -- | -0.748 | -- | 0.119 | 22.1 | -- | -- | -- | -- |
| 53.76 | 0.343 | 3 | -0.0759 | 0.306 | -- | -- | -- | 0.121 | 22 | -- | -- | -- | -- |
| 55.17 | 0.346 | 3.01 | -0.164 | -- | 0.309 | -- | -- | 0.0135 | -- | 25.6 | 738 | -- | -- |
| 53.21 | 0.34 | 3 | -- | 0.239 | 0.143 | -- | -- | 0.0829 | 22.4 | 25.6 | 706 | -- | -- |
| 59.4 | 0.36 | 2.99 | -0.0721 | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
| 53.91 | 0.343 | 2.99 | -- | 0.306 | -- | -- | -- | 0.129 | 22 | -- | -- | -- | -- |
| 55.83 | 0.348 | 3 | -- | -- | 0.28 | -- | -- | 0.041 | -- | 25.64 | 737 | -- | -- |
| 59.54 | 0.36 | 2.99 | -- | -- | -- | -- | -- | 0.129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.03 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 17 | 9 |
| 3 | 45.16 | temperature | 25.0 | 10 | > th | dose independent | rect. | 18 | 8 |
| 18 | 45.43 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 18 | 11 |
| 20 | 45.45 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 17 | 11 |
| 60 | 46.35 | temperature | 25.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 114 | 46.67 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 174 | 47.22 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 24 | 2 |
| 177 | 47.25 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 196 | 47.33 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 5 |
| 226 | 47.47 | temperature | 20.0 | 270 | > th | dose dependent | sin | 14 | NA |
| 234 | 47.51 | temperature | 25.0 | 270 | > th | dose independent | sin | 14 | NA |
| 273 | 47.65 | temperature | 25.0 | 10 | > th | dose independent | sin | 13 | NA |
| 274 | 47.65 | temperature | 25.0 | 90 | < th | dose independent | sin | 13 | NA |
| 276 | 47.65 | temperature | 30.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 286 | 47.67 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 13 |
| 296 | 47.70 | temperature | 25.0 | 10 | < th | dose independent | sin | 13 | NA |
| 299 | 47.70 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 19 | 23 |
| 300 | 47.70 | temperature | 25.0 | 10 | < th | dose dependent | sin | 13 | NA |
| 307 | 47.71 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 13 |
| 335 | 47.75 | humidity | 90.0 | 90 | < th | dose independent | rect. | 17 | 9 |
| 370 | 47.79 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 384 | 47.82 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 12 | 12 |
| 478 | 47.94 | temperature | 25.0 | 270 | < th | dose independent | rect. | 16 | 11 |
| 504 | 47.97 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 509 | 47.98 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 515 | 48.00 | humidity | 90.0 | 90 | < th | dose independent | rect. | 17 | 12 |
| 527 | 48.01 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 23 |
| 536 | 48.01 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 611 | 48.10 | temperature | 25.0 | 720 | < th | dose independent | rect. | 13 | 8 |
| 638 | 48.13 | humidity | 60.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 671 | 48.15 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 693 | 48.18 | temperature | 20.0 | 90 | > th | dose independent | rect. | 24 | 1 |
| 703 | 48.19 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 8 |
| 710 | 48.19 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 18 | 1 |
| 720 | 48.20 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 751 | 48.22 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 12 | 5 |
| 768 | 48.24 | wind | 1.0 | 720 | > th | dose independent | rect. | 12 | 1 |
| 796 | 48.26 | wind | 5.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 816 | 48.27 | temperature | 25.0 | 10 | > th | dose independent | rect. | 18 | 4 |
| 832 | 48.28 | temperature | 10.0 | 720 | > th | dose independent | rect. | 12 | 1 |
| 833 | 48.28 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 12 | 1 |
| 834 | 48.28 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 12 | 1 |
| 837 | 48.28 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 12 |
| 838 | 48.28 | temperature | 10.0 | 720 | > th | dose independent | rect. | 13 | 23 |
| 862 | 48.30 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 12 | 1 |
| 864 | 48.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 12 |
| 867 | 48.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 12 |
| 870 | 48.30 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 12 |
| 871 | 48.30 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 24 | 12 |
| 875 | 48.30 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 876 | 48.30 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 13 | 2 |
| 881 | 48.30 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 24 | 12 |
| 884 | 48.31 | radiation | 1.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 886 | 48.31 | temperature | 15.0 | 30 | > th | dose independent | rect. | 24 | 12 |
| 887 | 48.31 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 24 | 12 |
| 902 | 48.33 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 24 | 1 |
| 903 | 48.33 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 12 |
| 905 | 48.33 | humidity | 50.0 | 30 | > th | dose independent | rect. | 24 | 12 |
| 906 | 48.33 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 24 | 12 |
| 910 | 48.34 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 24 | 1 |
| 918 | 48.34 | wind | 9.0 | 30 | < th | dose independent | rect. | 19 | 23 |
| 919 | 48.34 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 920 | 48.34 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 922 | 48.34 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 24 | 6 |
| 925 | 48.35 | wind | 9.0 | 720 | < th | dose independent | rect. | 24 | 1 |
| 926 | 48.35 | temperature | 10.0 | 720 | > th | dose independent | rect. | 24 | 1 |
| 927 | 48.35 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 1 |
| 928 | 48.35 | humidity | 50.0 | 720 | > th | dose independent | rect. | 24 | 1 |
| 931 | 48.35 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 24 | 1 |
| 932 | 48.35 | radiation | 1.0 | 720 | < th | dose independent | rect. | 24 | 1 |
| 939 | 48.35 | humidity | 90.0 | 10 | < th | dose independent | rect. | 18 | 8 |
| 948 | 48.35 | temperature | 10.0 | 720 | > th | dose independent | rect. | 1 | 23 |
| 951 | 48.35 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 960 | 48.36 | humidity | 90.0 | 90 | < th | dose independent | rect. | 17 | 5 |
| 967 | 48.36 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 14 | 10 |
| 1000 | 48.39 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 18 | 1 |