Os07g0633100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : X8 domain containing protein.
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Os07g0633100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : X8 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.56 | 0.447 | 11.9 | -1.51 | 1.29 | 1.25 | 0.124 | -3.91 | -0.0798 | 9.35 | 26.57 | 1196 | -- | -- |
| 94.03 | 0.452 | 11.8 | -0.643 | 1.32 | 0.889 | 0.323 | -- | 0.0964 | 9.43 | 26.21 | 1110 | -- | -- |
| 90.49 | 0.443 | 11.9 | -1.41 | 1.28 | 1.22 | -- | -3.66 | -0.0368 | 9.34 | 26.99 | 1192 | -- | -- |
| 92.91 | 0.449 | 11.8 | -0.581 | 1.27 | 0.81 | -- | -- | 0.193 | 9.31 | 28.38 | 1154 | -- | -- |
| 178.78 | 0.623 | 11.9 | -1.15 | -- | 0.906 | -- | -2.2 | 0.0315 | -- | 26.73 | 1361 | -- | -- |
| 120.99 | 0.516 | 11.8 | -0.369 | 1.18 | -- | 0.174 | -- | 0.121 | 8.96 | -- | -- | -- | -- |
| 121.1 | 0.515 | 11.8 | -0.363 | 1.18 | -- | -- | -- | 0.121 | 8.97 | -- | -- | -- | -- |
| 180.35 | 0.625 | 11.8 | -0.56 | -- | 0.635 | -- | -- | 0.191 | -- | 28.47 | 1349 | -- | -- |
| 101.35 | 0.469 | 11.8 | -- | 1.25 | 0.698 | -- | -- | 0.263 | 9.31 | 28.7 | 1154 | -- | -- |
| 200.32 | 0.661 | 11.9 | -0.364 | -- | -- | -- | -- | 0.129 | -- | -- | -- | -- | -- |
| 124.56 | 0.522 | 11.8 | -- | 1.17 | -- | -- | -- | 0.162 | 9 | -- | -- | -- | -- |
| 187.7 | 0.638 | 11.8 | -- | -- | 0.533 | -- | -- | 0.282 | -- | 31.58 | 1274 | -- | -- |
| 203.81 | 0.666 | 11.9 | -- | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.99 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 5 | 87.46 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 16 | 88.17 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 18 | 88.22 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 15 |
| 23 | 88.46 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 3 |
| 44 | 88.88 | temperature | 25 | 720 | > th | dose dependent | sin | 13 | NA |
| 75 | 89.64 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 78 | 89.69 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 95 | 90.28 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 8 |
| 101 | 90.54 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 103 | 90.66 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 14 |
| 107 | 90.80 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 198 | 92.19 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 2 |
| 224 | 92.33 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 242 | 92.61 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 302 | 93.34 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 9 |
| 310 | 93.45 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 325 | 93.74 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 7 |
| 329 | 93.76 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 337 | 93.90 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 338 | 93.92 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 15 |
| 350 | 94.04 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 355 | 94.08 | temperature | 30 | 720 | < th | dose independent | sin | 13 | NA |
| 359 | 94.10 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 366 | 94.13 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 371 | 94.14 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 9 |
| 423 | 94.35 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 424 | 94.35 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 464 | 94.51 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 541 | 94.77 | wind | 5 | 43200 | > th | dose dependent | sin | 18 | NA |
| 578 | 94.85 | humidity | 70 | 1440 | < th | dose dependent | sin | 12 | NA |
| 585 | 94.87 | wind | 7 | 43200 | < th | dose independent | sin | 18 | NA |
| 661 | 95.13 | wind | 7 | 43200 | > th | dose independent | sin | 18 | NA |
| 745 | 95.36 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 14 |
| 760 | 95.40 | temperature | 30 | 720 | > th | dose independent | sin | 12 | NA |
| 803 | 95.45 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 18 |
| 837 | 95.51 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 15 |
| 847 | 95.52 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 868 | 95.56 | wind | 7 | 43200 | > th | dose independent | rect. | 4 | 17 |
| 882 | 95.58 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 891 | 95.59 | humidity | 50 | 720 | > th | dose dependent | sin | 16 | NA |
| 910 | 95.61 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 915 | 95.62 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 19 |