Os07g0629000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to P-type R2R3 Myb protein (Fragment).
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Os07g0629000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to P-type R2R3 Myb protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122.5 | 0.52 | 9.06 | -0.376 | 1.62 | 1.2 | -1.27 | -0.427 | 0.0874 | 5.51 | 20.2 | 777 | -- | -- |
| 123.18 | 0.517 | 9.05 | -0.295 | 1.61 | 1.2 | -1.21 | -- | 0.0864 | 5.53 | 20.7 | 806 | -- | -- |
| 126.27 | 0.523 | 9.05 | -0.377 | 1.59 | 1.25 | -- | -0.308 | 0.0914 | 5.53 | 20.29 | 820 | -- | -- |
| 126.53 | 0.524 | 9.04 | -0.321 | 1.6 | 1.28 | -- | -- | 0.102 | 5.54 | 20.3 | 820 | -- | -- |
| 250.96 | 0.738 | 9.05 | -0.364 | -- | 1.31 | -- | -0.197 | 0.15 | -- | 20.22 | 1081 | -- | -- |
| 164.65 | 0.602 | 8.99 | 0.152 | 1.58 | -- | -1.41 | -- | 0.364 | 5.1 | -- | -- | -- | -- |
| 169.69 | 0.61 | 8.99 | 0.153 | 1.57 | -- | -- | -- | 0.371 | 5.1 | -- | -- | -- | -- |
| 250.87 | 0.738 | 9.08 | -0.363 | -- | 1.41 | -- | -- | 0.108 | -- | 20.3 | 1140 | -- | -- |
| 128.95 | 0.529 | 9.03 | -- | 1.6 | 1.17 | -- | -- | 0.157 | 5.51 | 20.3 | 801 | -- | -- |
| 298.25 | 0.807 | 9.01 | 0.209 | -- | -- | -- | -- | 0.411 | -- | -- | -- | -- | -- |
| 170.31 | 0.61 | 8.99 | -- | 1.57 | -- | -- | -- | 0.354 | 5.09 | -- | -- | -- | -- |
| 253.71 | 0.742 | 9.06 | -- | -- | 1.26 | -- | -- | 0.168 | -- | 20.3 | 1083 | -- | -- |
| 299.4 | 0.808 | 9.01 | -- | -- | -- | -- | -- | 0.387 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.60 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 13 |
| 7 | 117.96 | temperature | 20 | 720 | > th | dose independent | rect. | 11 | 20 |
| 13 | 118.75 | temperature | 20 | 720 | > th | dose independent | rect. | 13 | 18 |
| 19 | 119.41 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 21 |
| 20 | 119.52 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 14 |
| 40 | 120.16 | temperature | 20 | 720 | < th | dose independent | sin | 12 | NA |
| 45 | 120.25 | temperature | 20 | 720 | > th | dose independent | sin | 11 | NA |
| 177 | 123.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 187 | 123.33 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 23 |
| 199 | 123.42 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 23 |
| 200 | 123.43 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 211 | 123.58 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 224 | 123.84 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 23 |
| 236 | 124.03 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 5 |
| 255 | 124.25 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 23 |
| 260 | 124.32 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 23 |
| 313 | 124.94 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 2 |
| 381 | 126.03 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 5 |
| 427 | 126.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 11 |
| 552 | 128.00 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 555 | 128.01 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 17 |
| 572 | 128.20 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 13 |
| 644 | 128.65 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 2 |
| 687 | 128.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 7 |
| 887 | 130.01 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 21 |
| 894 | 130.03 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 19 |