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Os07g0627300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Myb-related protein B (B-Myb).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0187) R2 : 0.251
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.563 (0.0456) R2dC : 0.251 R2C : 0.251
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.000297 (0.0393) R2dN8 : 1.21e-07 R2N8 : -1.75e-05
σ : 0.352
deviance : 56.7
__
_____
C
peak time of C : 2.17
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.09 0.297 10.2 0.463 0.442 0.803 0.108 -1.55 0.185 2.56 23.52 14 -- --
42.57 0.304 10.3 0.266 0.421 1.07 -0.374 -- 0.135 2.47 22.69 13 -- --
40.1 0.295 10.2 0.444 0.439 0.819 -- -1.47 0.182 2.52 23.37 11 -- --
43.07 0.306 10.3 0.278 0.418 1.08 -- -- 0.14 2.61 22.67 14 -- --
49.59 0.328 10.2 0.554 -- 1.04 -- -1.38 0.286 -- 25.12 11 -- --
55.89 0.35 10.3 0.0559 0.561 -- -0.429 -- 0.00559 2.08 -- -- -- --
56.58 0.352 10.3 0.0684 0.562 -- -- -- 0.00791 2.16 -- -- -- --
52.69 0.34 10.3 0.342 -- 1.32 -- -- 0.179 -- 22.67 14 -- --
44.99 0.312 10.3 -- 0.447 0.988 -- -- 0.105 2.51 22.5 13 -- --
75.42 0.406 10.3 0.0919 -- -- -- -- 0.0214 -- -- -- -- --
56.7 0.352 10.3 -- 0.563 -- -- -- 0.000297 2.17 -- -- -- --
55.44 0.347 10.3 -- -- 1.19 -- -- 0.137 -- 22.8 10 -- --
75.64 0.406 10.3 -- -- -- -- -- 0.0112 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 34.71 temperature 20 90 > th dose independent rect. 9 19
3 34.98 temperature 30 270 < th dose dependent rect. 15 16
4 35.13 temperature 20 270 > th dose independent rect. 7 20
5 35.15 temperature 30 90 < th dose dependent rect. 17 16
23 36.03 temperature 15 270 > th dose dependent rect. 19 8
40 36.88 temperature 25 270 < th dose dependent rect. 11 20
48 37.13 temperature 25 90 < th dose dependent rect. 15 20
54 37.25 temperature 25 90 < th dose dependent rect. 13 22
102 37.93 temperature 20 270 > th dose independent rect. 20 7
137 38.25 temperature 25 10 < th dose dependent rect. 12 21
138 38.26 temperature 20 10 > th dose independent rect. 20 9
170 38.49 temperature 15 10 > th dose dependent rect. 20 9
201 38.82 temperature 20 270 > th dose independent rect. 20 16
210 38.86 temperature 20 30 > th dose independent rect. 20 18
237 39.08 temperature 20 90 > th dose independent rect. 19 23
338 40.10 temperature 20 270 < th dose independent rect. 10 21
406 40.41 temperature 25 10 < th dose dependent rect. 3 23
447 40.65 temperature 20 90 < th dose independent rect. 15 20
453 40.66 temperature 25 10 < th dose dependent rect. 17 23
455 40.67 temperature 25 10 < th dose dependent rect. 5 23
458 40.69 temperature 25 10 < th dose dependent no NA NA
463 40.70 temperature 25 270 < th dose dependent sin 13 NA
477 40.76 temperature 15 270 > th dose dependent sin 11 NA
479 40.76 temperature 25 10 < th dose dependent rect. 23 23
510 40.84 temperature 25 90 < th dose dependent sin 11 NA
521 40.86 temperature 25 10 < th dose dependent rect. 19 23
532 40.89 temperature 25 30 < th dose dependent rect. 1 23
535 40.90 temperature 25 30 < th dose dependent rect. 21 23
537 40.91 temperature 25 30 < th dose dependent rect. 7 23
589 41.08 temperature 20 90 < th dose independent rect. 15 23
602 41.15 temperature 20 90 > th dose independent no NA NA
608 41.16 temperature 20 90 < th dose independent rect. 3 23
629 41.20 temperature 15 10 > th dose dependent rect. 9 19
638 41.23 temperature 20 90 < th dose independent no NA NA
651 41.25 temperature 20 90 < th dose independent rect. 21 23
693 41.39 temperature 20 90 < th dose independent rect. 1 23
739 41.51 temperature 20 90 < th dose independent rect. 7 23
748 41.55 temperature 20 90 < th dose independent rect. 19 23
757 41.57 humidity 70 43200 < th dose independent rect. 6 2
776 41.61 humidity 60 43200 < th dose independent rect. 8 1
786 41.64 humidity 80 43200 < th dose independent rect. 23 14
788 41.65 humidity 60 43200 > th dose independent rect. 7 2
805 41.69 wind 3 43200 < th dose independent rect. 16 1
825 41.73 wind 1 43200 < th dose independent rect. 2 1
827 41.73 humidity 80 43200 < th dose independent rect. 21 18
835 41.74 wind 3 43200 < th dose independent rect. 14 3
848 41.76 humidity 80 43200 > th dose independent rect. 20 19
853 41.77 wind 7 43200 < th dose independent rect. 5 4
886 41.80 humidity 50 43200 > th dose dependent rect. 21 16
898 41.82 humidity 50 43200 > th dose independent rect. 7 5
910 41.84 humidity 80 43200 < th dose independent sin 5 NA
913 41.84 wind 3 43200 < th dose independent rect. 13 5
919 41.85 temperature 20 43200 < th dose independent rect. 15 2
924 41.86 temperature 20 43200 > th dose independent rect. 14 3
929 41.87 wind 3 43200 > th dose independent rect. 15 2
936 41.88 humidity 50 43200 < th dose independent rect. 8 4
937 41.88 temperature 10 43200 > th dose independent rect. 10 9
938 41.88 humidity 80 43200 > th dose independent rect. 23 14
963 41.90 temperature 20 43200 > th dose independent rect. 9 11
969 41.90 temperature 20 43200 < th dose dependent rect. 22 1
970 41.90 temperature 20 43200 < th dose dependent rect. 3 6
974 41.90 temperature 20 43200 < th dose dependent rect. 21 12
977 41.90 temperature 20 43200 < th dose dependent rect. 18 14
999 41.91 temperature 20 43200 > th dose independent rect. 11 9