Os07g0626300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0626300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.54 | 0.247 | 11.1 | 0.335 | 0.526 | 0.348 | 0.468 | 0.689 | 0.185 | 20.8 | 32.76 | 5068 | -- | -- |
| 28.24 | 0.247 | 11.1 | 0.407 | 0.537 | 0.362 | 0.434 | -- | 0.189 | 20.8 | 32.02 | 5099 | -- | -- |
| 28.27 | 0.248 | 11.1 | 0.329 | 0.523 | 0.349 | -- | 0.657 | 0.184 | 20.7 | 32.77 | 5072 | -- | -- |
| 28.84 | 0.25 | 11.1 | 0.392 | 0.533 | 0.38 | -- | -- | 0.199 | 20.7 | 31.91 | 5091 | -- | -- |
| 42.14 | 0.302 | 11.1 | 0.215 | -- | 0.274 | -- | 0.828 | 0.22 | -- | 42.13 | 8840 | -- | -- |
| 32.28 | 0.266 | 11.1 | 0.424 | 0.483 | -- | 0.455 | -- | 0.146 | 20.9 | -- | -- | -- | -- |
| 32.98 | 0.269 | 11.1 | 0.409 | 0.483 | -- | -- | -- | 0.146 | 20.9 | -- | -- | -- | -- |
| 42.67 | 0.306 | 11.1 | 0.424 | -- | 0.267 | -- | -- | 0.151 | -- | 31.91 | 5091 | -- | -- |
| 32.89 | 0.267 | 11.1 | -- | 0.537 | 0.405 | -- | -- | 0.205 | 20.8 | 32.81 | 5122 | -- | -- |
| 46.27 | 0.318 | 11.1 | 0.409 | -- | -- | -- | -- | 0.143 | -- | -- | -- | -- | -- |
| 37.38 | 0.286 | 11.2 | -- | 0.482 | -- | -- | -- | 0.101 | 20.9 | -- | -- | -- | -- |
| 46.15 | 0.316 | 11.1 | -- | -- | 0.375 | -- | -- | 0.226 | -- | 36.99 | 8824 | -- | -- |
| 50.67 | 0.332 | 11.1 | -- | -- | -- | -- | -- | 0.0975 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.80 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 9 | 25.14 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 30 | 25.36 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 32 | 25.36 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 48 | 25.42 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 68 | 25.54 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 76 | 25.57 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 84 | 25.59 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 90 | 25.61 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 95 | 25.64 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 122 | 25.71 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 197 | 25.89 | wind | 5.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 256 | 25.99 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 385 | 26.13 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 19 |
| 416 | 26.17 | wind | 1.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 451 | 26.21 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 21 |
| 592 | 26.42 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 599 | 26.43 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 623 | 26.45 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 17 |
| 633 | 26.46 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 19 |
| 656 | 26.49 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 682 | 26.52 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 724 | 26.58 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 15 |
| 751 | 26.61 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 17 |
| 762 | 26.64 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 813 | 26.71 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 822 | 26.72 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 857 | 26.76 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 874 | 26.77 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 911 | 26.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 2 |
| 930 | 26.84 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 935 | 26.85 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 939 | 26.85 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 950 | 26.88 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 951 | 26.88 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 985 | 26.92 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 989 | 26.92 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 10 |