Os07g0622900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0622900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.33 | 0.442 | 7.69 | 0.276 | 0.565 | 1.45 | -0.496 | 1.4 | 0.0602 | 10.6 | 26.27 | 114 | -- | -- |
| 90.45 | 0.443 | 7.67 | 0.523 | 0.586 | 1.4 | -0.725 | -- | 0.113 | 11.1 | 27.94 | 113 | -- | -- |
| 89.09 | 0.44 | 7.7 | 0.249 | 0.572 | 1.48 | -- | 1.56 | 0.065 | 10.9 | 26.77 | 114 | -- | -- |
| 92.5 | 0.448 | 7.66 | 0.505 | 0.601 | 1.45 | -- | -- | 0.124 | 11.4 | 28.11 | 113 | -- | -- |
| 103.22 | 0.473 | 7.71 | 0.249 | -- | 1.38 | -- | 1.27 | 0.0534 | -- | 26.7 | 366 | -- | -- |
| 117.71 | 0.509 | 7.74 | 0.174 | 0.483 | -- | -1.05 | -- | -0.187 | 8.42 | -- | -- | -- | -- |
| 121.19 | 0.516 | 7.74 | 0.141 | 0.485 | -- | -- | -- | -0.187 | 8.4 | -- | -- | -- | -- |
| 104.72 | 0.477 | 7.69 | 0.49 | -- | 1.31 | -- | -- | 0.1 | -- | 27.82 | 498 | -- | -- |
| 98.53 | 0.462 | 7.69 | -- | 0.567 | 1.24 | -- | -- | 0.0235 | 11.1 | 28.33 | 104 | -- | -- |
| 134.31 | 0.542 | 7.75 | 0.144 | -- | -- | -- | -- | -0.182 | -- | -- | -- | -- | -- |
| 121.71 | 0.516 | 7.74 | -- | 0.486 | -- | -- | -- | -0.203 | 8.38 | -- | -- | -- | -- |
| 110.4 | 0.489 | 7.7 | -- | -- | 1.14 | -- | -- | 0.0157 | -- | 27.6 | 434 | -- | -- |
| 134.86 | 0.542 | 7.75 | -- | -- | -- | -- | -- | -0.198 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.21 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 13 | 82.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 18 |
| 26 | 85.28 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 16 | 17 |
| 27 | 85.50 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 28 | 85.54 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 20 | 9 |
| 33 | 85.64 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 49 | 86.45 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 59 | 86.86 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 15 |
| 60 | 86.86 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 76 | 87.50 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 78 | 87.59 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 111 | 88.32 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 112 | 88.33 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 4 | 14 |
| 117 | 88.41 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 119 | 88.50 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 130 | 88.67 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 140 | 88.78 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 17 |
| 154 | 89.00 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 161 | 89.03 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 166 | 89.09 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 225 | 89.81 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 288 | 90.36 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 312 | 90.56 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 317 | 90.58 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 21 |
| 378 | 91.01 | temperature | 25.0 | 720 | < th | dose independent | rect. | 8 | 16 |
| 432 | 91.33 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 10 | 13 |
| 460 | 91.46 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 9 | 20 |
| 467 | 91.50 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 17 |
| 495 | 91.65 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 508 | 91.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 23 |
| 526 | 91.76 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 15 |
| 559 | 91.89 | temperature | 30.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 614 | 92.13 | temperature | 25.0 | 720 | < th | dose independent | sin | 20 | NA |
| 624 | 92.17 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 631 | 92.21 | temperature | 25.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 643 | 92.28 | temperature | 20.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 652 | 92.29 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 689 | 92.40 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 741 | 92.66 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 14 |
| 795 | 92.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 23 |
| 799 | 92.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 811 | 92.98 | temperature | 25.0 | 720 | > th | dose independent | sin | 20 | NA |
| 860 | 93.18 | temperature | 25.0 | 90 | < th | dose independent | rect. | 5 | 16 |
| 916 | 93.41 | temperature | 25.0 | 720 | < th | dose independent | rect. | 14 | 8 |
| 917 | 93.41 | temperature | 25.0 | 720 | < th | dose independent | rect. | 13 | 10 |
| 926 | 93.44 | temperature | 25.0 | 720 | < th | dose independent | rect. | 15 | 6 |
| 951 | 93.52 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 979 | 93.63 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 20 | 9 |