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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0622300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.87 (0.0145) R2 : 0.000252
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0103 (0.0305) R2dN8 : 0.000326 R2N8 : 0.000252
σ : 0.273
deviance : 34.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.82 0.269 2.87 0.0502 0.206 -0.201 0.203 -0.161 0.00111 2.28 2.82 85 -- --
32.87 0.267 2.87 0.0444 0.22 -0.212 0.0294 -- 0.000639 2.19 3 85 -- --
32.87 0.267 2.87 0.0436 0.2 -0.197 -- -0.0231 0.00018 2.2 2.996 80 -- --
32.87 0.267 2.87 0.0437 0.199 -0.195 -- -- -0.000304 2.29 3 83 -- --
33.48 0.27 2.87 0.0517 -- -0.0737 -- -0.022 0.00594 -- 7.544 47 -- --
33.41 0.271 2.86 0.0484 0.105 -- 0.0407 -- 0.0149 8.43 -- -- -- --
33.41 0.271 2.86 0.0496 0.104 -- -- -- 0.0148 8.43 -- -- -- --
33.48 0.269 2.87 0.0541 -- -0.0744 -- -- 0.0106 -- 7.649 42 -- --
32.92 0.267 2.87 -- 0.202 -0.197 -- -- -0.00539 2.27 3 83 -- --
34.02 0.273 2.87 0.0502 -- -- -- -- 0.0159 -- -- -- -- --
33.48 0.271 2.86 -- 0.105 -- -- -- 0.00932 8.4 -- -- -- --
33.55 0.27 2.87 -- -- -0.0735 -- -- 0.0049 -- 7.77 38 -- --
34.09 0.273 2.87 -- -- -- -- -- 0.0103 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.04 temperature 25.0 90 > th dose independent rect. 6 1
2 30.14 wind 1.0 30 < th dose independent rect. 6 1
3 30.17 temperature 20.0 90 > th dose dependent rect. 6 1
4 30.19 radiation 40.0 1440 < th dose independent rect. 7 1
5 30.24 humidity 90.0 90 < th dose independent rect. 6 1
6 30.25 humidity 90.0 30 < th dose dependent rect. 6 1
7 30.26 radiation 20.0 30 < th dose dependent rect. 6 1
9 30.29 wind 1.0 30 > th dose dependent rect. 6 1
11 30.30 atmosphere 1015.0 30 < th dose dependent rect. 6 1
18 30.36 atmosphere 1005.0 30 > th dose independent rect. 6 1
19 30.36 radiation 1.0 10 > th dose dependent rect. 6 1
25 30.39 wind 5.0 30 < th dose independent rect. 6 1
28 30.39 temperature 10.0 30 > th dose independent rect. 6 1
30 30.39 temperature 30.0 30 < th dose independent rect. 6 1
31 30.39 humidity 50.0 30 > th dose independent rect. 6 1
36 30.39 atmosphere 1015.0 30 < th dose independent rect. 6 1
37 30.39 radiation 1.0 30 > th dose independent rect. 6 1
38 30.39 radiation 20.0 30 < th dose independent rect. 6 1
41 30.39 precipitation 0.1 30 < th dose independent rect. 6 1
42 30.39 temperature 10.0 30 > th dose independent rect. 7 23
43 30.39 precipitation 0.1 30 < th dose dependent rect. 6 1
44 30.40 wind 9.0 1440 < th dose independent rect. 7 1
45 30.40 temperature 10.0 1440 > th dose independent rect. 7 1
49 30.40 temperature 30.0 1440 < th dose independent rect. 7 1
53 30.40 humidity 50.0 1440 > th dose independent rect. 7 1
59 30.40 atmosphere 995.0 1440 > th dose independent rect. 7 1
60 30.40 atmosphere 1015.0 1440 < th dose independent rect. 7 1
62 30.40 temperature 10.0 1440 > th dose independent rect. 8 23
66 30.41 wind 9.0 30 < th dose independent rect. 7 23
67 30.43 humidity 50.0 30 > th dose dependent rect. 6 1
71 30.44 wind 9.0 30 < th dose dependent rect. 6 1
77 30.46 wind 1.0 30 > th dose independent rect. 6 1
83 30.48 atmosphere 995.0 30 > th dose dependent rect. 6 1
129 30.71 temperature 30.0 30 < th dose dependent rect. 6 1
142 30.90 atmosphere 1000.0 90 < th dose independent rect. 6 1
143 30.90 atmosphere 1000.0 10 < th dose independent rect. 7 1
153 30.90 atmosphere 1000.0 10 < th dose dependent rect. 7 1
220 31.38 atmosphere 995.0 30 > th dose independent rect. 7 23
222 31.40 precipitation 0.1 30 < th dose independent rect. 7 23
224 31.40 precipitation 0.1 30 < th dose dependent rect. 7 23
260 31.53 temperature 25.0 10 > th dose dependent rect. 2 5
342 31.82 atmosphere 1015.0 30 < th dose independent rect. 7 23
372 31.88 temperature 25.0 30 > th dose independent rect. 2 6
389 31.89 temperature 25.0 10 > th dose dependent rect. 24 7
390 31.90 humidity 60.0 10 > th dose independent rect. 8 22
430 31.95 temperature 30.0 30 < th dose independent rect. 7 23
461 32.00 temperature 25.0 30 > th dose independent rect. 23 9
485 32.04 humidity 90.0 720 < th dose independent rect. 1 6
488 32.05 humidity 90.0 720 > th dose independent rect. 3 1
517 32.12 wind 9.0 720 < th dose independent rect. 19 8
520 32.12 humidity 70.0 1440 < th dose dependent rect. 8 1
524 32.13 humidity 70.0 1440 > th dose independent rect. 3 4
526 32.13 temperature 15.0 720 > th dose independent rect. 19 8
527 32.13 humidity 60.0 720 > th dose independent rect. 19 8
531 32.13 radiation 1.0 720 < th dose dependent rect. 19 8
533 32.14 temperature 30.0 720 < th dose independent rect. 19 8
535 32.14 atmosphere 995.0 720 > th dose independent rect. 19 8
536 32.14 radiation 1.0 720 < th dose independent rect. 19 8
541 32.14 temperature 10.0 720 > th dose independent rect. 3 16
542 32.14 atmosphere 1015.0 720 < th dose independent rect. 3 16
562 32.16 wind 1.0 10 < th dose dependent rect. 7 3
565 32.17 humidity 60.0 270 < th dose independent rect. 8 1
585 32.17 humidity 90.0 720 > th dose independent rect. 1 4
606 32.17 radiation 30.0 1440 < th dose independent rect. 18 13
610 32.17 humidity 60.0 270 < th dose dependent rect. 8 1
644 32.18 wind 1.0 10 < th dose independent rect. 8 2
667 32.19 humidity 60.0 30 < th dose independent rect. 9 1
704 32.19 temperature 15.0 720 > th dose independent rect. 15 16
708 32.19 humidity 60.0 10 < th dose dependent rect. 9 1
812 32.20 temperature 10.0 720 > th dose independent rect. 7 8
816 32.20 atmosphere 1015.0 720 < th dose independent rect. 7 8
890 32.21 atmosphere 1000.0 270 < th dose independent rect. 4 1
898 32.21 humidity 70.0 1440 > th dose independent rect. 23 8
900 32.21 radiation 40.0 720 < th dose independent rect. 15 16
904 32.21 atmosphere 1000.0 270 < th dose dependent rect. 4 1
912 32.21 wind 1.0 10 < th dose dependent rect. 9 13
914 32.21 wind 1.0 10 < th dose dependent rect. 6 16
929 32.22 humidity 70.0 1440 > th dose independent rect. 21 10
931 32.22 radiation 30.0 1440 < th dose independent rect. 21 10
992 32.24 radiation 40.0 30 > th dose dependent rect. 9 1