Os07g0622000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Serine/threonine-protein kinase SAPK2 (EC 2.7.1.37) (Osmotic stress/abscisic acid-activated protein kinase 2).
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Os07g0622000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Serine/threonine-protein kinase SAPK2 (EC 2.7.1.37) (Osmotic stress/abscisic acid-activated protein kinase 2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.44 | 0.353 | 13.2 | -0.00585 | 0.834 | -6.54 | -0.752 | 16.1 | 0.397 | 15.6 | 0.117 | 94 | -- | -- |
| 58.49 | 0.356 | 13.1 | 0.0436 | 0.806 | -2.16 | -0.756 | -- | 0.363 | 15.5 | 0.05996 | 86 | -- | -- |
| 58.11 | 0.355 | 13.2 | -0.0115 | 0.833 | -6.36 | -- | 15.7 | 0.393 | 15.8 | 0.2335 | 93 | -- | -- |
| 59.87 | 0.36 | 13.1 | 0.0741 | 0.828 | -2.04 | -- | -- | 0.382 | 15.7 | 0.399 | 86 | -- | -- |
| 96.36 | 0.457 | 13.2 | -0.0471 | -- | -6.08 | -- | 14 | 0.367 | -- | 0.0001793 | 93 | -- | -- |
| 66.86 | 0.383 | 13.1 | 0.158 | 0.845 | -- | -0.629 | -- | 0.371 | 15.7 | -- | -- | -- | -- |
| 67.98 | 0.386 | 13.1 | 0.148 | 0.846 | -- | -- | -- | 0.368 | 15.9 | -- | -- | -- | -- |
| 97.77 | 0.461 | 13.1 | 0.0617 | -- | -2.18 | -- | -- | 0.36 | -- | 0.4992 | 86 | -- | -- |
| 60.02 | 0.361 | 13.1 | -- | 0.829 | -2.05 | -- | -- | 0.375 | 15.7 | 0.3501 | 86 | -- | -- |
| 107.3 | 0.484 | 13.1 | 0.113 | -- | -- | -- | -- | 0.345 | -- | -- | -- | -- | -- |
| 68.56 | 0.387 | 13.1 | -- | 0.843 | -- | -- | -- | 0.351 | 15.9 | -- | -- | -- | -- |
| 97.78 | 0.461 | 13.1 | -- | -- | -2.21 | -- | -- | 0.358 | -- | 0.49 | 86 | -- | -- |
| 107.64 | 0.484 | 13.1 | -- | -- | -- | -- | -- | 0.333 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.16 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 3 | 16 |
| 3 | 55.40 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 20 | 23 |
| 5 | 55.46 | precipitation | 0.1 | 90 | < th | dose independent | sin | 1 | NA |
| 7 | 55.46 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 1 | NA |
| 14 | 56.04 | humidity | 50.0 | 270 | > th | dose independent | rect. | 11 | 7 |
| 16 | 56.09 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 17 |
| 33 | 56.15 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 43 | 56.23 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 45 | 56.25 | precipitation | 0.1 | 90 | > th | dose independent | sin | 0 | NA |
| 74 | 56.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 92 | 56.50 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 1 | NA |
| 96 | 56.52 | precipitation | 0.1 | 90 | > th | dose independent | no | NA | NA |
| 97 | 56.52 | precipitation | 0.1 | 90 | < th | dose independent | no | NA | NA |
| 108 | 56.52 | precipitation | 0.1 | 90 | < th | dose dependent | no | NA | NA |
| 116 | 56.62 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 14 | 5 |
| 119 | 56.63 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 15 | 23 |
| 126 | 56.66 | precipitation | 0.1 | 90 | < th | dose independent | sin | 19 | NA |
| 127 | 56.66 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 19 | NA |
| 149 | 56.79 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 17 |
| 175 | 56.83 | temperature | 25.0 | 10 | < th | dose independent | rect. | 16 | 4 |
| 176 | 56.83 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 189 | 56.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 195 | 56.93 | temperature | 30.0 | 270 | < th | dose independent | rect. | 12 | 6 |
| 226 | 57.01 | precipitation | 0.1 | 90 | > th | dose dependent | no | NA | NA |
| 251 | 57.09 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 254 | 57.10 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 17 |
| 255 | 57.12 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 262 | 57.14 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 23 |
| 267 | 57.14 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 269 | 57.17 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 12 | 17 |
| 277 | 57.23 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 7 |
| 294 | 57.33 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 5 |
| 298 | 57.34 | humidity | 70.0 | 90 | > th | dose independent | rect. | 13 | 7 |
| 321 | 57.44 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 332 | 57.46 | humidity | 70.0 | 90 | > th | dose independent | rect. | 15 | 5 |
| 333 | 57.46 | temperature | 25.0 | 30 | < th | dose independent | rect. | 14 | 6 |
| 335 | 57.46 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 21 |
| 359 | 57.56 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 13 | 17 |
| 360 | 57.57 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 12 | 6 |
| 363 | 57.60 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 418 | 57.79 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 16 | 4 |
| 420 | 57.80 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 12 | 8 |
| 424 | 57.82 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 22 |
| 436 | 57.84 | humidity | 70.0 | 90 | > th | dose independent | rect. | 13 | 17 |
| 448 | 57.88 | precipitation | 0.1 | 10 | > th | dose independent | sin | 22 | NA |
| 452 | 57.90 | temperature | 20.0 | 90 | > th | dose independent | rect. | 22 | 8 |
| 454 | 57.90 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 17 | 2 |
| 464 | 57.93 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 12 | 8 |
| 473 | 57.96 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 8 |
| 474 | 57.97 | precipitation | 0.1 | 90 | > th | dose independent | sin | 15 | NA |
| 477 | 57.97 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 3 |
| 490 | 58.00 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 22 | NA |
| 509 | 58.05 | humidity | 70.0 | 90 | > th | dose independent | rect. | 15 | 15 |
| 514 | 58.07 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 18 |
| 518 | 58.07 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 18 |
| 539 | 58.11 | humidity | 80.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 542 | 58.11 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 12 | 20 |
| 587 | 58.20 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 631 | 58.27 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 678 | 58.33 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 713 | 58.40 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 16 |
| 733 | 58.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 10 |
| 736 | 58.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 767 | 58.45 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 14 | NA |
| 797 | 58.48 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 10 |
| 808 | 58.49 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 815 | 58.50 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 12 |
| 822 | 58.51 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 830 | 58.53 | humidity | 90.0 | 10 | < th | dose independent | sin | 1 | NA |
| 849 | 58.55 | precipitation | 0.1 | 10 | < th | dose independent | sin | 19 | NA |
| 854 | 58.55 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 19 | NA |
| 881 | 58.58 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 9 | 9 |
| 886 | 58.58 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 22 | 22 |
| 907 | 58.61 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 7 |