Os07g0619400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Calcium-binding EF-hand domain containing protein.
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Os07g0619400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Calcium-binding EF-hand domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 209.49 | 0.68 | 10.3 | -2.25 | 0.285 | 0.579 | 1.24 | 5.81 | 0.591 | 22.1 | 0.3582 | 16219 | -- | -- |
| 217.14 | 0.686 | 10.4 | -2.59 | 0.358 | 1.74 | 1.27 | -- | 0.697 | 21.9 | 0.7875 | 17198 | -- | -- |
| 214.78 | 0.683 | 10.3 | -2.33 | 0.308 | 0.604 | -- | 5.75 | 0.589 | 23.6 | 0.3499 | 16168 | -- | -- |
| 216.39 | 0.685 | 10.4 | -2.73 | 0.306 | 2.19 | -- | -- | 0.691 | 0.177 | 0.5842 | 18084 | -- | -- |
| 220.27 | 0.691 | 10.3 | -2.28 | -- | 0.573 | -- | 5.86 | 0.602 | -- | 0.3773 | 16192 | -- | -- |
| 305.12 | 0.819 | 10.4 | -1.77 | 0.296 | -- | 1.29 | -- | 0.51 | 22.3 | -- | -- | -- | -- |
| 311.21 | 0.826 | 10.4 | -1.83 | 0.303 | -- | -- | -- | 0.504 | 23.7 | -- | -- | -- | -- |
| 222.01 | 0.694 | 10.4 | -2.72 | -- | 2.17 | -- | -- | 0.699 | -- | 0.6753 | 18282 | -- | -- |
| 351.96 | 0.874 | 10.3 | -- | 0.163 | 1.29 | -- | -- | 1.01 | 23.1 | 0.09074 | 16238 | -- | -- |
| 316.98 | 0.832 | 10.4 | -1.82 | -- | -- | -- | -- | 0.508 | -- | -- | -- | -- | -- |
| 399.16 | 0.935 | 10.4 | -- | 0.282 | -- | -- | -- | 0.707 | 23.3 | -- | -- | -- | -- |
| 356.09 | 0.879 | 10.3 | -- | -- | 1.28 | -- | -- | 1.02 | -- | 0.004417 | 16186 | -- | -- |
| 404.15 | 0.938 | 10.4 | -- | -- | -- | -- | -- | 0.709 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 203.11 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 2 | 203.13 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 3 | 203.81 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 4 | 203.81 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 7 | 203.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 22 | 205.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 23 | 205.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 24 | 205.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 8 |
| 25 | 205.50 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 53 | 206.53 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 71 | 208.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 6 |
| 81 | 208.41 | humidity | 60.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 89 | 208.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 17 |
| 107 | 208.86 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 12 |
| 190 | 210.10 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 198 | 210.27 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 23 | NA |
| 222 | 210.75 | humidity | 60.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 237 | 211.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 14 |
| 250 | 211.27 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 18 |
| 254 | 211.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 20 |
| 257 | 211.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 16 |
| 305 | 211.94 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 311 | 212.02 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 325 | 212.03 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 326 | 212.04 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |
| 409 | 212.17 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 431 | 212.37 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 21 | NA |
| 433 | 212.40 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 21 | NA |
| 434 | 212.40 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 21 | NA |
| 481 | 212.76 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 483 | 212.79 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 499 | 212.81 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 19 |
| 502 | 212.82 | humidity | 60.0 | 14400 | < th | dose independent | sin | 21 | NA |
| 531 | 212.83 | humidity | 60.0 | 14400 | > th | dose independent | no | NA | NA |
| 587 | 212.88 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 588 | 212.88 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 591 | 212.89 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 639 | 213.06 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 643 | 213.06 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 661 | 213.13 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 670 | 213.17 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 18 |
| 676 | 213.19 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 7 |
| 687 | 213.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 726 | 213.40 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 830 | 213.77 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 841 | 213.87 | humidity | 60.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 910 | 214.17 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |