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Os07g0618700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.94 (0.0359) R2 : 0.927
β1 : -0.785 (0.131) R2dD : 0.00584 R2D : 0.00573
β2 : 2.71 (0.104) R2dC : 0.152 R2C : -0.312
β3 : -6.69 (0.0902) R2dE : 1.23 R2E : 0.768
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0908 (0.0767) R2dN8 : 0.000296 R2N8 : 0.00106
σ : 0.671
deviance : 207.81
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_____
C
peak time of C : 14.4
E
wheather : temperature
threshold : 14.82
memory length : 283
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.93
open length of G : 7.91

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
207.6 0.677 8.94 -0.766 2.68 -6.6 -0.0858 -0.361 0.0896 14.5 14.84 279 3.95 7.92
207.59 0.671 8.95 -0.769 2.71 -6.64 -0.341 -- 0.0866 14.5 14.8 282 3.95 7.91
207 0.67 8.94 -0.75 2.67 -6.62 -- -0.404 0.0925 14.5 14.8 283 3.92 7.92
207.81 0.671 8.94 -0.785 2.71 -6.69 -- -- 0.0908 14.4 14.82 283 3.93 7.91
351.52 0.873 8.91 -0.74 -- -5.56 -- -1.01 0.278 -- 14.8 231 3.52 8.02
695.21 1.24 9.09 -0.701 6.12 -- 0.908 -- 0.214 21 -- -- -- --
698.04 1.24 9.09 -0.731 6.12 -- -- -- 0.213 21 -- -- -- --
349.64 0.871 8.93 -0.744 -- -5.63 -- -- 0.173 -- 14.83 234 3.49 8.05
223.6 0.696 8.92 -- 2.64 -6.72 -- -- 0.151 14.5 14.9 289 3.85 7.92
2842.18 2.49 8.92 -0.725 -- -- -- -- 0.174 -- -- -- -- --
712.13 1.25 9.07 -- 6.12 -- -- -- 0.295 21 -- -- -- --
363.37 0.888 8.91 -- -- -5.61 -- -- 0.26 -- 14.82 233 3.43 8.13
2856.06 2.49 8.91 -- -- -- -- -- 0.254 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 212.74 temperature 15.0 270 > th dose independent rect. 4 8
2 216.01 radiation 20.0 270 < th dose independent rect. 16 8
3 216.57 precipitation 0.1 270 < th dose independent rect. 4 8
4 216.57 precipitation 0.1 270 < th dose dependent rect. 4 8
5 218.76 wind 9.0 270 < th dose independent rect. 4 8
6 220.16 humidity 50.0 270 > th dose independent rect. 17 18
7 220.17 atmosphere 1015.0 270 < th dose independent rect. 24 16
8 220.23 temperature 10.0 270 > th dose independent rect. 16 8
9 220.23 radiation 40.0 270 < th dose independent rect. 16 8
10 220.23 temperature 10.0 270 > th dose independent rect. 24 16
12 220.29 atmosphere 995.0 270 > th dose independent rect. 4 8
13 220.29 atmosphere 1015.0 270 < th dose independent rect. 4 8
14 220.29 temperature 10.0 270 > th dose independent rect. 12 16
15 220.50 wind 9.0 270 < th dose independent rect. 12 16
17 224.62 radiation 40.0 270 < th dose dependent rect. 16 8
18 224.85 wind 9.0 270 < th dose independent rect. 24 16
19 225.39 wind 9.0 270 < th dose independent rect. 16 8
20 225.64 temperature 10.0 270 > th dose independent rect. 11 6
21 225.64 atmosphere 1015.0 270 < th dose independent rect. 11 6
22 225.64 temperature 10.0 270 > th dose independent rect. 17 18
23 226.31 wind 9.0 270 < th dose independent rect. 17 18
24 226.57 precipitation 0.1 270 < th dose independent rect. 11 6
25 226.57 precipitation 0.1 270 < th dose dependent rect. 11 6
26 227.12 humidity 50.0 270 > th dose independent rect. 4 8
27 227.75 wind 9.0 270 < th dose independent rect. 11 6
28 228.16 atmosphere 995.0 270 > th dose independent rect. 17 18
29 230.72 precipitation 0.1 270 < th dose independent rect. 12 16
30 230.72 precipitation 0.1 270 < th dose dependent rect. 12 16
32 232.32 precipitation 0.1 270 < th dose independent rect. 24 16
33 232.32 precipitation 0.1 270 < th dose dependent rect. 24 16
34 232.66 precipitation 0.1 270 < th dose independent rect. 17 18
35 232.66 precipitation 0.1 270 < th dose dependent rect. 17 18
38 235.21 atmosphere 995.0 270 > th dose independent rect. 24 16
39 236.65 wind 1.0 270 > th dose independent rect. 11 6
40 236.75 atmosphere 995.0 270 > th dose independent rect. 16 8
43 239.14 precipitation 0.1 270 < th dose independent rect. 16 8
44 239.14 precipitation 0.1 270 < th dose dependent rect. 16 8
46 240.89 humidity 50.0 270 > th dose independent rect. 16 8
47 241.30 wind 1.0 270 > th dose independent rect. 16 8
64 249.42 radiation 1.0 270 > th dose independent rect. 11 6
68 250.98 atmosphere 995.0 270 > th dose independent rect. 11 6
93 256.35 temperature 10.0 90 > th dose dependent rect. 13 16
114 261.63 radiation 10.0 270 < th dose dependent rect. 22 9
170 269.62 temperature 10.0 270 > th dose independent rect. 22 8
171 269.62 temperature 30.0 270 < th dose independent rect. 22 8
172 269.62 humidity 50.0 270 > th dose independent rect. 22 8
175 269.62 atmosphere 995.0 270 > th dose independent rect. 22 8
176 269.62 radiation 20.0 270 < th dose independent rect. 22 8
179 269.62 temperature 10.0 270 > th dose independent rect. 6 16
180 269.74 wind 9.0 270 < th dose independent rect. 22 8
194 270.29 radiation 1.0 90 > th dose independent rect. 4 9
222 271.35 temperature 10.0 90 > th dose dependent rect. 5 8
246 274.82 temperature 10.0 270 > th dose dependent rect. 22 8
261 276.87 precipitation 0.1 270 < th dose independent rect. 22 8
262 276.87 precipitation 0.1 270 < th dose dependent rect. 22 8
266 277.38 humidity 90.0 270 < th dose independent rect. 11 6
268 277.69 wind 9.0 270 < th dose independent rect. 6 16
272 278.44 wind 9.0 270 < th dose independent rect. 12 4
273 278.47 wind 1.0 270 > th dose independent rect. 17 6
277 279.03 temperature 10.0 270 > th dose independent rect. 12 4
279 279.03 atmosphere 1015.0 270 < th dose independent rect. 12 4
280 279.03 temperature 10.0 270 > th dose independent rect. 16 20
281 279.16 wind 9.0 270 < th dose independent rect. 16 20
282 279.31 atmosphere 995.0 270 > th dose independent rect. 12 16
287 279.58 precipitation 0.1 270 < th dose independent rect. 12 4
288 279.58 precipitation 0.1 270 < th dose dependent rect. 12 4
321 282.79 temperature 30.0 270 < th dose independent rect. 17 18
329 283.37 radiation 1.0 270 < th dose independent rect. 22 16
334 283.57 wind 1.0 270 > th dose independent rect. 12 4
338 284.10 precipitation 0.1 270 < th dose independent rect. 6 16
339 284.10 precipitation 0.1 270 < th dose dependent rect. 6 16
341 284.32 atmosphere 1015.0 270 < th dose independent rect. 22 8
350 284.96 humidity 50.0 270 > th dose independent rect. 24 16
367 286.85 precipitation 0.1 270 < th dose independent rect. 16 20
368 286.85 precipitation 0.1 270 < th dose dependent rect. 16 20
373 287.14 wind 1.0 270 > th dose independent rect. 4 8
382 288.33 radiation 1.0 270 < th dose dependent rect. 22 16
383 288.37 wind 1.0 270 > th dose independent rect. 5 6
394 289.25 atmosphere 995.0 270 > th dose independent rect. 12 4
415 290.09 temperature 30.0 270 < th dose independent rect. 18 16
418 290.20 atmosphere 1015.0 270 < th dose independent rect. 12 16
419 290.32 wind 1.0 270 > th dose independent rect. 17 18
438 291.42 temperature 10.0 270 > th dose dependent rect. 11 6
441 291.63 humidity 50.0 270 > th dose dependent rect. 22 8
485 295.74 temperature 10.0 10 > th dose dependent rect. 6 7
501 297.00 temperature 10.0 270 > th dose dependent rect. 12 4
607 305.36 temperature 30.0 270 < th dose independent rect. 17 6
618 306.34 temperature 30.0 270 < th dose independent rect. 5 6
626 307.43 temperature 30.0 270 < th dose independent rect. 16 8
660 308.16 radiation 1.0 270 < th dose dependent sin 7 NA
671 309.24 atmosphere 1015.0 270 < th dose independent rect. 6 16
696 312.16 atmosphere 995.0 270 > th dose independent rect. 6 16
746 314.86 wind 9.0 10 < th dose independent rect. 6 7
760 315.92 precipitation 0.1 10 < th dose independent rect. 6 7
761 315.92 precipitation 0.1 10 < th dose dependent rect. 6 7
771 316.66 temperature 10.0 10 > th dose independent rect. 6 7
773 316.66 atmosphere 995.0 10 > th dose independent rect. 6 7
774 316.66 atmosphere 1015.0 10 < th dose independent rect. 6 7
775 316.66 temperature 10.0 10 > th dose independent rect. 13 17
776 316.78 wind 9.0 270 < th dose dependent rect. 22 8
778 316.85 wind 1.0 10 > th dose independent rect. 6 7
786 317.50 radiation 1.0 270 < th dose independent sin 8 NA
791 317.75 radiation 1.0 270 > th dose independent sin 8 NA
804 318.27 radiation 1.0 10 > th dose independent rect. 6 7
810 318.83 radiation 40.0 90 < th dose independent rect. 13 16
824 319.74 wind 1.0 270 > th dose independent rect. 6 16
862 321.01 humidity 50.0 270 > th dose independent rect. 12 4
876 321.12 radiation 40.0 10 < th dose independent rect. 13 17
886 321.39 wind 9.0 10 < th dose independent rect. 13 17
887 321.44 atmosphere 995.0 270 > th dose independent rect. 13 2
936 323.80 wind 9.0 270 < th dose dependent rect. 5 7
956 324.45 humidity 90.0 90 < th dose independent rect. 5 8
958 324.53 atmosphere 1015.0 270 < th dose independent rect. 17 6
961 324.92 temperature 10.0 1440 > th dose independent rect. 7 7
964 324.92 atmosphere 995.0 1440 > th dose independent rect. 7 7
965 324.92 temperature 10.0 1440 > th dose independent rect. 14 17