Os07g0616200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-ketoacyl-ACP synthase.
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Os07g0616200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-ketoacyl-ACP synthase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.69 | 0.582 | 9.26 | -0.57 | 1.91 | 2.35 | -1.18 | -19.9 | -0.775 | 17 | 29.9 | 3982 | -- | -- |
| 181.86 | 0.633 | 9.67 | -4 | 1.9 | 0.143 | -1.18 | -- | -1.04 | 16.9 | 29.9 | 3982 | -- | -- |
| 157.19 | 0.584 | 9.26 | -0.565 | 1.9 | 2.34 | -- | -19.9 | -0.778 | 17 | 29.9 | 3982 | -- | -- |
| 181.71 | 0.632 | 9.66 | -3.9 | 1.9 | 0.405 | -- | -- | -0.982 | 16.8 | 19.12 | 23075 | -- | -- |
| 346.21 | 0.867 | 9.25 | -0.702 | -- | 2.43 | -- | -19.6 | -0.854 | -- | 29.85 | 3827 | -- | -- |
| 182.52 | 0.633 | 9.67 | -4.02 | 1.87 | -- | -1.25 | -- | -1.03 | 16.9 | -- | -- | -- | -- |
| 186.51 | 0.64 | 9.67 | -4.02 | 1.86 | -- | -- | -- | -1.04 | 16.9 | -- | -- | -- | -- |
| 356.44 | 0.883 | 9.65 | -4.15 | -- | -0.555 | -- | -- | -1.06 | -- | 29.85 | 3827 | -- | -- |
| 251.89 | 0.739 | 9.41 | -- | 1.84 | 3.01 | -- | -- | 0.129 | 17 | 18.43 | 47520 | -- | -- |
| 368.22 | 0.897 | 9.65 | -4.09 | -- | -- | -- | -- | -1.09 | -- | -- | -- | -- | -- |
| 612.96 | 1.16 | 9.57 | -- | 1.93 | -- | -- | -- | -0.592 | 16.8 | -- | -- | -- | -- |
| 429.99 | 0.966 | 9.38 | -- | -- | 3.09 | -- | -- | 0.107 | -- | 18.41 | 47520 | -- | -- |
| 809.69 | 1.33 | 9.55 | -- | -- | -- | -- | -- | -0.634 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.92 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 18 |
| 2 | 148.16 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 7 | 150.16 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 15 | 150.82 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 22 | 151.03 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 16 |
| 25 | 151.19 | humidity | 90.0 | 270 | < th | dose independent | rect. | 20 | 20 |
| 28 | 151.36 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 31 | 151.48 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 42 | 152.20 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 48 | 152.44 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 49 | 152.44 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 7 |
| 50 | 152.46 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 19 |
| 57 | 152.63 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 62 | 152.73 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 4 | 18 |
| 76 | 153.03 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 1 | 8 |
| 78 | 153.04 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 10 | NA |
| 80 | 153.15 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 89 | 153.36 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 95 | 153.50 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 106 | 153.78 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 111 | 153.83 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 113 | 153.88 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 118 | 153.96 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 120 | 153.98 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 121 | 153.99 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 126 | 154.03 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 180 | 154.38 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 3 | 5 |
| 200 | 154.42 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 210 | 154.52 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 218 | 154.56 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 224 | 154.62 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 241 | 154.83 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 244 | 154.84 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 249 | 154.93 | radiation | 20.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 266 | 154.97 | radiation | 40.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 296 | 155.10 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 301 | 155.11 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 313 | 155.18 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 365 | 155.30 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 377 | 155.35 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 380 | 155.35 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 384 | 155.37 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 12 | 20 |
| 385 | 155.38 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 433 | 155.47 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 440 | 155.49 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 480 | 155.59 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 2 | 18 |
| 504 | 155.65 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 511 | 155.67 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 517 | 155.68 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 555 | 155.69 | radiation | 10.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 603 | 155.74 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 18 |
| 615 | 155.77 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 13 | 9 |
| 624 | 155.78 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 13 | 7 |
| 641 | 155.83 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 659 | 155.85 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 667 | 155.86 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 669 | 155.86 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 676 | 155.89 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 709 | 155.92 | radiation | 40.0 | 43200 | < th | dose dependent | sin | 18 | NA |
| 731 | 155.94 | radiation | 10.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 752 | 155.95 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 10 | 11 |
| 794 | 155.98 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 819 | 156.00 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 9 | 14 |
| 833 | 156.01 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 950 | 156.08 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 977 | 156.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 9 |
| 995 | 156.11 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 15 | 20 |